| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Sda_chr09g00240.1 | E3 UBIQUITIN-PROTEIN LIGASE CHIP | Sda_Chr9 | 17641860 | 17694622 | - |
| CDS | |||||
| Sda_chr09g00240.1 | |||||
| Transcript |
| Sda_chr09g00240.1 |
| Protein |
| Sda_chr09g00240.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|U-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04564 | U-box | U-box domain | Domain | Interproscan |
| PF12895 | ANAPC3 | Anaphase-promoting complex, cyclosome, subunit 3 | Repeat | Interproscan |
| PF18391 | CHIP_TPR_N | CHIP N-terminal tetratricopeptide repeat domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003613 | Domain | U-box domain | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR041312 | Domain | CHIP, N-terminal tetratricopeptide repeat domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46803 | E3 UBIQUITIN-PROTEIN LIGASE CHIP | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000209 | Biological Process | protein polyubiquitination | Interproscan |
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006515 | Biological Process | protein quality control for misfolded or incompletely synthesized proteins | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0030018 | Cellular Component | Z disc | Interproscan |
| GO:0043161 | Biological Process | proteasome-mediated ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0045862 | Biological Process | positive regulation of proteolysis | Interproscan |
| GO:0051087 | Molecular Function | protein-folding chaperone binding | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0071218 | Biological Process | cellular response to misfolded protein | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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