Detailed information of Sda_chr06g02167.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr06g02167.1DNA-DIRECTED RNA POLYMERASESda_Chr6173365218173511831-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00623RNA_pol_Rpb1_2RNA polymerase Rpb1, domain 2DomainInterproscan
PF01347Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF04983RNA_pol_Rpb1_3RNA polymerase Rpb1, domain 3DomainInterproscan
PF04997RNA_pol_Rpb1_1RNA polymerase Rpb1, domain 1DomainInterproscan
PF04998RNA_pol_Rpb1_5RNA polymerase Rpb1, domain 5DomainInterproscan
PF05000RNA_pol_Rpb1_4RNA polymerase Rpb1, domain 4DomainInterproscan
PF06448DUF1081Domain of Unknown Function (DUF1081)FamilyInterproscan
PF09172Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000722DomainRNA polymerase, alpha subunitInterproscan
IPR001747DomainVitellogenin, N-terminalInterproscan
IPR006592DomainRNA polymerase, N-terminalInterproscan
IPR007066DomainRNA polymerase Rpb1, domain 3Interproscan
IPR007080DomainRNA polymerase Rpb1, domain 1Interproscan
IPR007081DomainRNA polymerase Rpb1, domain 5Interproscan
IPR007083DomainRNA polymerase Rpb1, domain 4Interproscan
IPR009454DomainLipid transport, open beta-sheetInterproscan
IPR011030Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR015255DomainVitellinogen, open beta-sheetInterproscan
IPR015699DomainDNA-directed RNA pol I, largest subunit, N-terminal domainInterproscan
IPR015816Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan
IPR015817Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR015819Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR038120Homologous_superfamilyRNA polymerase Rpb1, funnel domain superfamilyInterproscan
IPR042102Homologous_superfamilyRNA polymerase Rpb1, domain 3 superfamilyInterproscan
IPR044893Homologous_superfamilyRNA polymerase Rpb1, clamp domain superfamilyInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR047107DomainDNA-directed RNA pol I, largest subunit, C-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001054Molecular FunctionRNA polymerase I activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0005736Cellular ComponentRNA polymerase I complexInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0006869Biological Processlipid transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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