Gene detail

Detailed information of Sda_chr05g01513.1 in Siphonodentalium dalli Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Sda_chr05g01513.1	BCS1 AAA-TYPE ATPASE	Sda_Chr5	112327766	112379982	+

Gene Structure

More details in Jbrowse Sequence

CDS

Sda_chr05g01513.1

ATGACAATTGCTGAACTAATATTATCTTTGAAAGACAATCCTTATTTTGGAGCTGGATTTGGGTTGTTTGGTGTTGGCATGGCAACTGCTTTGGGACGTAAAGGATACCAGTATGGCTCTGTCCTATTCAGGAGGCACTGTGTGATGACATTGGAGGTAACCAGTAAAGACAAGTGTTATGATTGGATACTTGAATGGCTAGGGTCTCATAGGAAGTCAATTCGCCACATATCTGTTGAAACGACCTATAGCCAGACAGAATCAGGAAAGGTGAACACCAAGTTTGATTTCGTTCCTAGTCCTGAGACTCACTTTTTCACACACAACAGTATGTGGATCAGAGTCGAGAGAACACGAGAGAAACAAATGATTGATATGAACAGAGGAACTCCATTTGAAACCGTTGTTTTGACCACTCTTGCACTTAACAAAAATATTTATCATGATATTCTGGAGGAGGCGCGGCTCATGGCTTTAACCAAGTTAGAAGGGCGGACACTTATGTATACAGCAATGGGTGGTGACTGGCATCTGTTTGGACTTCCAAGGAGAAAGCGGCCTTTAGACTCTGTTGTGCTTGATCATGGAATATCTGAGCGCATTCTCACTGATATTAAACGGTTCATTTATAACCCCGCATGGTACAGAGACAGGGGCATTCCATACAGGAGAGGCTATCTGTTACATGGTCCTCCAGGCTGTGGAAAATCAAGCTACATCACAGCTTTAGCAGGTGAGCTTGACCACAGCATATGTGTGTTGAATCTGAGTGAGAAGGGAATGATAGACGACAGGCTCAACCATCTGATGGTCAACGCACCTGAACAGAGTATTATTCTTCTTGAGGATATTGATGCAGCATTCGTCAGTAGAGATCTCGCAAAGGAGAACCCAACTGTATATCAGGGCATGGGCAGATTAACTTTCAGTGGGTTATTGAATGCCTTAGATGGGGTGGCATCTTCAGAAGGAAGGATTGTGTTTATGACAACAAATTACGTGGAAAGATTAGATGCTGCATTAATCAGACCTGGAAGGATTGATTGGAAGGAAAAAATTGACAATTGTTCCCAGTATCAAACAGAACAGATGTTTACCAGGTTCTATCCAGAAAATAGTGACAAATCTTCCGAGTTTGCAAATGCTGTGCTCGCTGAAAAGCAACCTGGGTGTCATGGAAACCCACTCAGGGTTGCTATTAACCCTCAAAATGCCGGCATCGGCGAAAATGTTCGCCGTGAAATGAAGCTAACAGCCCGGACCGCCCCTGCTGCGTCCAGGTGCTACATACGAGAGGATAGCATGCCTGTCTTCATATGTGACCACTGTGAGGCAAAGGCTGGCGGCTTCGCTGAGGCAATCGACCATGGGATTTTACAACACCCGAATGAACTTGGTGATAAATCTGAGCACGTGGCCCTCAATCAGTGGCAACTCGCCCGACAACGAGACAATCACGGTGTTTATTGTTTGGAGCCTCAACTCACATCACCTATAGTCGATGCGGGAGAGCTGCAGGAAACAACAGTGACATATATGAGCATATTGGAGACCAGTGCATATCTGTTTATGTCGTCGGAGAAAGAGCTTCTGCCATATCTGAGAATAAAGTGCAATTTGATCTGCCCTTTCGGGTTCAACACAGACCTGGAAGGAAACCCAATATGTAAATGTCGCGACCCTTGCAAGAATATTTACTGCTTAGGAGCTACCAGATGCGTGGTGGTGTTACCCAAAACCAAAGCATGTTCCATTCCATCGTTTGGCTGTAAAGCAAAGGCCGAGTGTCGAGAGATGACCCAAAGGGACGCACCGAGACCTCAAGAGGAGGAGGTTTGCTCACTGCACCTGACCTCCAGTGCGTTCAGATGCTCGAAGAAAAGGAAGCGATGGTATTACAACGAAAAGTTTGGAAAATGCATGAAGTTTTACGGCTGTGATAGCACGGGTAACAACTTCTCAAGGAAGAGGTACTGCAAGAAAGAGTGCTACCCTAAACGGAGGAAGAACAGGAGGATGACGAGAAAACACCGGCGATATTGA

Transcript

Sda_chr05g01513.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF00014	Kunitz_BPTI	Kunitz/Bovine pancreatic trypsin inhibitor domain	Domain	Interproscan
PF02822	Antistasin	Antistasin family	Domain	Interproscan
PF08740	BCS1_N	BCS1 N terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002223	Domain	Pancreatic trypsin inhibitor Kunitz domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR004094	Domain	Antistasin-like domain	Interproscan
IPR011061	Homologous_superfamily	Hirudin/antistatin	Interproscan
IPR014851	Domain	BCS1, N-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036880	Homologous_superfamily	Pancreatic trypsin inhibitor Kunitz domain superfamily	Interproscan
IPR050747	Family	Mitochondrial chaperone BCS1 subfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23070	BCS1 AAA-TYPE ATPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004857	Molecular Function	enzyme inhibitor activity	Interproscan
GO:0004867	Molecular Function	serine-type endopeptidase inhibitor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005743	Cellular Component	mitochondrial inner membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0032979	Biological Process	protein insertion into mitochondrial inner membrane from matrix	Interproscan
GO:0034551	Biological Process	mitochondrial respiratory chain complex III assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-