Detailed information of Sda_chr05g00248.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr05g00248.1TYROSYL-DNA PHOSPHODIESTERASE 1Sda_Chr51951036419545649+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02201SWIBSWIB/MDM2 domainDomainInterproscan
PF06087Tyr-DNA_phosphoTyrosyl-DNA phosphodiesteraseFamilyInterproscan
PF10283zf-CCHHPBZ domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR003121DomainSWIB/MDM2 domainInterproscan
IPR010347FamilyTyrosyl-DNA phosphodiesterase IInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019406DomainAprataxin and PNK-like factor, PBZ domainInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR036885Homologous_superfamilySWIB/MDM2 domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12415TYROSYL-DNA PHOSPHODIESTERASE 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008081Molecular Functionphosphoric diester hydrolase activityInterproscan
GO:0017005Molecular Function3'-tyrosyl-DNA phosphodiesterase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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