| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Sda_chr04g00718.1 | GEM-ASSOCIATED PROTEIN 4 | Sda_Chr4 | 57784887 | 57833298 | - |
| CDS | |||||
| Sda_chr04g00718.1 | |||||
| Transcript |
| Sda_chr04g00718.1 |
| Protein |
| Sda_chr04g00718.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09631 | Sen15 | Sen15 protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011856 | Homologous_superfamily | tRNA endonuclease-like domain superfamily | Interproscan |
| IPR018593 | Domain | tRNA-splicing endonuclease subunit Sen15 | Interproscan |
| IPR033265 | Family | Gem-associated protein 4 | Interproscan |
| IPR036167 | Homologous_superfamily | tRNA intron endonuclease, catalytic domain-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15571 | GEM-ASSOCIATED PROTEIN 4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000387 | Biological Process | spliceosomal snRNP assembly | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0006364 | Biological Process | rRNA processing | Interproscan |
| GO:0006388 | Biological Process | tRNA splicing, via endonucleolytic cleavage and ligation | Interproscan |
| GO:0032797 | Cellular Component | SMN complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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