Detailed information of Sda_chr03g02027.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr03g02027.1BREAST CANCER METASTASIS-SUPPRESSOR 1Sda_Chr3152120961152160089+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF04218CENP-B_NCENP-B N-terminal DNA-binding domainDomainInterproscan
PF08598Sds3Sds3-likeFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001387DomainCro/C1-type helix-turn-helix domainInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR013907FamilySds3-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21964BREAST CANCER METASTASIS-SUPPRESSOR 1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0042826Molecular Functionhistone deacetylase bindingInterproscan
GO:0070822Cellular ComponentSin3-type complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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