Detailed information of Sda_chr03g01704.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr03g01704.1TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)Sda_Chr3121768887121874970+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05729NACHTNACHT domainDomainInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051787FamilyEffector and Ciliary Development-Associated ProteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45641TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001822Biological Processkidney developmentInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007368Biological Processdetermination of left/right symmetryInterproscan
GO:0060026Biological Processconvergent extensionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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