Detailed information of Sda_chr03g01203.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr03g01203.1METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEINSda_Chr38371115383850199+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyMYB

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00118Cpn60_TCP1TCP-1/cpn60 chaperonin familyFamilyInterproscan
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF01426BAHBAH domainDomainInterproscan
PF01448ELM2ELM2 domainFamilyInterproscan
PF17226MTA_R1MTA R1 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000679DomainZinc finger, GATA-typeInterproscan
IPR000949DomainELM2 domainInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR002194Conserved_siteChaperonin TCP-1, conserved siteInterproscan
IPR002423FamilyChaperonin Cpn60/GroEL/TCP-1 familyInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR012717FamilyT-complex protein 1, delta subunitInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR017884DomainSANT domainInterproscan
IPR017998FamilyChaperone tailless complex polypeptide 1 (TCP-1)Interproscan
IPR027409Homologous_superfamilyGroEL-like apical domain superfamilyInterproscan
IPR027410Homologous_superfamilyTCP-1-like chaperonin intermediate domain superfamilyInterproscan
IPR027413Homologous_superfamilyGroEL-like equatorial domain superfamilyInterproscan
IPR035170DomainMetastasis-associated protein MTA1, R1 domainInterproscan
IPR040138FamilyMesoderm induction early response protein/metastasis-associated proteinInterproscan
IPR053374FamilyTCP-1 chaperonin-containing T-complexInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10865METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006457Biological Processprotein foldingInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan
GO:0016581Cellular ComponentNuRD complexInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0042826Molecular Functionhistone deacetylase bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0051082Molecular Functionunfolded protein bindingInterproscan
GO:0140662Molecular FunctionATP-dependent protein folding chaperoneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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