Gene detail

Detailed information of Sda_chr03g00397.1 in Siphonodentalium dalli Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Sda_chr03g00397.1	ALPHA-GLUCOSIDASE	Sda_Chr3	29883377	29909264	-

Gene Structure

More details in Jbrowse Sequence

CDS

Sda_chr03g00397.1

ATGGCCGACGCTAACGACACAAAGGAAAGTGAATGGGAAAAGCAGAAGACGAAAAAGCCGTTGAATAAGACAATTCTTATCGCTGTGGTTCTTCTTATTGTTGGGGCTGGTGTCGGAGTGGGATTTGCTATAAACTACGACTTGAATAGTTCCGACGATGGAACTGACGCCGTGTCGACAGAAGGATTTAAGATGGAGACCAAAACACAACCAACAGCAGGGCCTGTTATGTCAACGATTCGTTACTATGACGATGCGAACGACGTAGTGATAGATTGTCACCCGGATCCTCATGGAACAAAGAGCTCTTGTGAATCTCGTGGGTGTGAGTGGCGCCCAGTCAGGAGTCTTGGGATACCATGGTGTGTTACTCCCCCAAATATGCATGGCTTCAACCTGGTTGGCGACGCAGAAAACACGACGGCCTACCAAAACGTCTCGTTGAATCTCAGAAATATGAATTCGACCTATCGAATGTTCCCAATGAAGTATTATGACGACATCAGAGTGGAGATATACCAGGAGTGCGACTATAGACTGCGAATTAAGATACATCCACCTTGGGCCACGTCGCCACGATACGAAGTTCCTATCAGCTACGACGGCATCCAATGTGGCGAAAGGCAGACGGGAAACAGACTATACCAAGTCGACTACGAACATGACCGTGAGAAAGAATTCTGGTTTAAAGTAACTAGGACTGGAAGCGAATACATCCGCACTGTATTTGATACCCGGACTCCTGGGTTTATATTCGGTGATCAGTTTATCCAGATCACGACGCGCTTACAAGATGGCGGGAATGTTTACGGATTTGGGGAACATTTCCACCAGAGCTTCAGTCACAATATGAATTGGAAGACGTGGACAATATTCACGCGGGACAACGGCCCTAATAATGACTACAATCTGTATGGTGCTCATCCTGTTCACATGTATATCGACGACAACCACGACGCCTCAATGGTGTATCTCAAGAACAGTAACGCAATGGATATCTCACTGCAACCTGACCCCTATGGTGCTATAACATATCGAACGATCGGTGGAATCCTGGATTTCTACATTTTCCTTGGTCCGACACCAGCAGACGCCATCAAGCAGTACACAGAGCTGGTAGGTAGGCCGATGATGCCACCTTATTGGGGACTTGGTTTCCATCTATGCAGATGGGGGTATAAGTCGCTCTGGGATGTTAAAGAAGTCGTCGAAAGACAGAAACAGGCTAACATACCACAGGATGTGCAATGGATTGACATCGATTACATGTTCGAGAAGCTGGACTACACGTATAATAAAGCGACGTTTGGTGGTCTGCCAGAATTCGCCGACCAACTCCACAAAGAAGGAAAACGCCTGATACCGATCCAGGATATTGGGATTGGTATAGAGGATAGGATCGTTAGCCAGGCGATATGGAACAGTCCGGGTTATAACATGTACAAAGACTTGGAAGCATCGGGTGCCTACATCGGAAAACCTGATGGTTCCGGTCCGCTTGTTTGGCCAGGGAAAGTTATCTATCCGGATTTCACCAACACGCATGACGCAGAGGAATGGTGGTTGGACTGGATGCAATATTTTTATAGAAATGAATCGGTTCAATACGACGGATTGTGGATCGACATGAACGAACCGTCAAGTTTCATACCCGGGTCAGAGAACGGATGTGAGAAAAATACCTGGAATAATCCACCATATTGTCCGAATGTCCTTGGTCGCGGCGACGATGGTCGGCTATACGATAAGACGGTCTGTATGGATTCCATTCAAAGCAAGGGAAGGCACTACGATGTCCACAACTTATACGCACATTTCCAAGCCGAGGTCACCAATAGAGCACTCAAGAGACAGATGCCCGGCAAAAGACCATTCCTTGTAACCCGGTCTTCTTTTGCGGGAACCGGAAGATGGTCAGCTAAATGGGAAGGAGATAACCAGAGCAAATGGAACCAGCTTCGACATAGTATCATATTTCTTATGGAATTCAGTATATTTGGCTTCGCTTTC

Transcript

Sda_chr03g00397.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00088	Trefoil	Trefoil (P-type) domain	Domain	Interproscan
PF01055	Glyco_hydro_31_2nd	Glycosyl hydrolases family 31 TIM-barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000322	Domain	Glycoside hydrolase family 31, TIM barrel domain	Interproscan
IPR000519	Domain	P-type trefoil domain	Interproscan
IPR011013	Homologous_superfamily	Galactose mutarotase-like domain superfamily	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR030458	Active_site	Glycosyl hydrolases family 31, active site	Interproscan
IPR044913	Homologous_superfamily	P-type trefoil domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22762	ALPHA-GLUCOSIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0004558	Molecular Function	alpha-1,4-glucosidase activity	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-