Gene detail

Detailed information of Sda_chr02g01756.1 in Siphonodentalium dalli Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Sda_chr02g01756.1	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN	Sda_Chr2	149949782	150030040	+

Gene Structure

More details in Jbrowse Sequence

CDS

Sda_chr02g01756.1

ATCTCTTCTCCTGCAATATTCCAATACTCGTTGGACTTCATCCATGAGTGCTTGACAATGGTCGGATTTGGTCCGGGTGTGGTATTGTTATTAGTACTGTGGTATTTGGAGGAACTCTATCAGTACCTCAAGAAAGGATGCCAGCTTCGGAAGATAAAAAAGAAAGGAAAGAAGTTATACAACCGGTTCTTCTACCTGGATACGACGACCATGTCGCTACGGTACCAGGGTTCAACCAAGAAGTTCTCTTCCGTCAACGACATAAAATTGTCGAAGTTGCAAGAGGTTCGAGAAGGCGAAAAGGACTTTTCTAAAGAACTGTCATCGTACGAGCTATACGCCGTTGAATGCATATTTTCTTTGTATTCCTTAACTTGTGTCACGTGGATCAGGGATGCTTTCAATACAGCGGACAAAAACGGCGACGGAAAGCTGGACATTGATGAGATTATGGGTCTGCTGAAGGTGCTAAACGCTGATATCGACCGCAAGTTTGTCAGGCAGATATTCGAGAAAGCTGACACACGAAAGTCTTCGAGACGTGGGAAGCCAACGCTTGATAGAGAGGAGTTTGTAGAATTCTATTATATGCTAACTCGCCGACCGGAACTAGAGTCTATATTTATGCAATACTCACACGGAAAGGGTTACCTGGCCTCTAACGACATCACTAATTTCTTCCAAGATGCTATGCATGTACGAACTGTTAATAATGGATATGGTGATTCGATATATATCTGTGTACGAACTTTGCCTTCATGCAGTATGTGTGCATCATATTTTTTCAAAATAACAGGGTTCAGGAACCTGATGGTTTCCAGAAGGGAGCAACTATACAATCCACAACATAGGAACATCTACCAAGATACAACTCGACCATTTACAGATTACTTCATAAACTCATCTCATAACACGTACCTCACTGCCGACCAACTGAAGGGGCCCAGCAGCACGGAGGCATATGCGAGTGCCCTAAAGAAGGGATGTCGGTGTGTCGAATTGGATTGTTGGGACGGACCAGATGGAGAGCCAGTCATATATCACGGTCATACGCTAACGTCAAAAATCCTTTTCAAAGACGTCATATCAGCCATAAAGGTCTACGCATTCGAAGTTTCGCCGTACCCTGTCACTTTGTCAATAGAGAATCACTGTACCACACCTCAACAAATAACTATGGCGAAGCATTGTAAAGAAATTTTAGGAGAAATGCTGTATACACCGAAATCAATAGATTGTTGCCCATCTCCCGAAGAACTCAAGAATAAGATTATTATCAAGGGAAAGAAAGCGCAAGCCACCTCGTCGAATGAGGAAGGTTTGGGGGAGATAAGTGAAGAGGATGATGATGAGGACACTTCCGGTCATATTCACAACAACCAACGAGCATCTCTCGCCGCCAAAGAAGAGGATCTGGACCAGATACCACAACAGACAAAAAAACGTGTTGACAAGAAAATTAAAGTGGCAAAAGAGTTCTCCTGCCTGACTGGTATGGAGAGCGTTGGCTACAAGGACATGGATAAAGCATTCACTAGCGGAGGACCATTCTCTATATTCTCACTTGGCGAATCGAAGATCAAGAAACAACAGAATATAGACATCGCCAAAATGAATAAGTTAACACACGGAAAGCTTCTGAGGATTTACCCTGCAGGAACAAGGACTGACTCTAGCAACTATAACCCTGTACCAATGTGGACTTCTGGATGTCAAGTCGTTGCACTGAACTTCCAAACGCCTGGAGAAGCTATGGAGTTGAATCACGGTAGATTCATGGACAACGGTGGAATAGGATACGTCCTGAAGCCTAAATTCCTACTTGATGTTAGCGGGAAGTTACCACGACCGAACCAGAAAGAACTTAAAATTAAGATAATCAGTGGTTGCCAAATACCCAAGCCAAAGGGCACCAACAAGGGCGAAATTATAGATCCTTTCTGCAAGATAGAGGTTCGTGGTATATCAGAGGACTTCCACGAGGGAAGCACTCGAGTGGTTGAAAACAACGGCCTTAATCCAATCTGGAACCAGACATTCACATTCAATATCGCCGTGCCGGAGTTAGCAATCGTACGATTCAGAGTGTTAGATTACGATACGGCCAACAACGACTTCATCGGATACTATGCACTTCCCCTCATGAGCATGCAACAAGGATATCGACATTTCCCACTGTATGACAAGTATGGAGAGCTCTACAGACAGTGCCACATATTCACCCACGTGTCAATCACCGACGTATCGGCAGCAGCAATAAACAACAAGTGA

Transcript

Sda_chr02g01756.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168	C2	C2 domain	Domain	Interproscan
PF00387	PI-PLC-Y	Phosphatidylinositol-specific phospholipase C, Y domain	Family	Interproscan
PF00388	PI-PLC-X	Phosphatidylinositol-specific phospholipase C, X domain	Family	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008	Domain	C2 domain	Interproscan
IPR000909	Domain	Phosphatidylinositol-specific phospholipase C, X domain	Interproscan
IPR001192	Family	Phosphoinositide phospholipase C family	Interproscan
IPR001711	Domain	Phospholipase C, phosphatidylinositol-specific, Y domain	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR017946	Homologous_superfamily	PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10336	PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004435	Molecular Function	phosphatidylinositol phospholipase C activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0006629	Biological Process	lipid metabolic process	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0008081	Molecular Function	phosphoric diester hydrolase activity	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0048015	Biological Process	phosphatidylinositol-mediated signaling	Interproscan
GO:0051209	Biological Process	release of sequestered calcium ion into cytosol	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-