Detailed information of Sda_chr02g00799.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr02g00799.1SWI/SNF COMPLEX-RELATEDSda_Chr27668499676737539+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyMYB

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF04433SWIRMSWIRM domainDomainInterproscan
PF16495SWIRM-assoc_1SWIRM-associated region 1FamilyInterproscan
PF16498SWIRM-assoc_3SWIRM-associated domain at the C-terminalFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001005DomainSANT/Myb domainInterproscan
IPR007526DomainSWIRM domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017884DomainSANT domainInterproscan
IPR032448DomainSMARCC, SWIRM-associated domainInterproscan
IPR032451DomainSMARCC, C-terminalInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR049898DomainMarR-like, BRCT and chromo domains moduleInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12802SWI/SNF COMPLEX-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016514Cellular ComponentSWI/SNF complexInterproscan
GO:0031492Molecular Functionnucleosomal DNA bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0071564Cellular ComponentnpBAF complexInterproscan
GO:0071565Cellular ComponentnBAF complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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