Gene detail

Detailed information of Sda_chr02g00446.1 in Siphonodentalium dalli Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Sda_chr02g00446.1	CHITIN SYNTHASE	Sda_Chr2	43747618	43919924	+

Gene Structure

More details in Jbrowse Sequence

CDS

Sda_chr02g00446.1

ATGGCGGATGTCGAGGATATTTCATACCTAGATAACTTGGATATCGATAATGTGGTTGATAATATTGAGAAAAGGTTCGACCGTGCAGAAATCTATACTCGATGCGGGGACATTCTAATAGCTGTCAATCCATTCAGAGATCTCGGTCTGTACACCACAAAGAACCATGAAAAGCATGCATTGGAATCCAACACATCATCTCTCCAGCCACATATTTTTGAGACCGCGACAAAAGCATACAGACGGCTATGTGATACCAAAACAGACCAGGTTATCCTGGTCAGCGGTGAATCTGGCGCGGGGAAAACGGAGAGCACAAAGTATCTGGTTAAACATCTTATGTTCCTGAGTGGCAAGGGTGCCTCCTCTCTACACGAGAAAGTCATACAGGTGAACCCATTGCTGGAAGCTTTTGGGAATGCAAAAACTATTCTGAACGATAACTCTAGTCGATATGCCAAATATCTGGAGCTAAAGTTTGCTACAAGTGGCCAGCTGTTGGGTGGTAAGTATATTAACTATATGCTGGAAAAAAGTAGAATAGTGAATCAGGGGATGTCAGAAAGTAACTTCCATGTATTTTATGCGCTGCTTCTGAGTGGTGAATCAAACATGTTGTCAAGGCTCAATCTGCTAACACCGGCAGATTACAGAATAACAAAACAATTTAAACTTTCAACTCCAAGGACAGCAGTGTATAAGAGGTGGTACACACTCATCAGGAAGGTGTTCAATTTACTACAATTTGATGATGACGTAAAGGAGAATTTGGTGATGTTAGCCTGCTGTGGGGATAGTATCACTAAAATCACCTTCTGGGAACCTCATTCTGCAAATGACAGACACACTATTTGCAGAATTGCACTTGACATTAAAAATAATATGTTGAGCCACTTTTTTGCAGGGGAGGTGATTGCTACGAACAAGAGCTATGCTCAAGCAGAAGATGGGAGAGATGCACTAGCTAAGGCATTATATGAGAGATTGTTTGGCTATGTTGTTAAGAGGATTAATGAATCATTATTCCCTGATGATCTATGTTCTGATGGAGGGTCAATCAGTATTGTGGACATCTGCGGGTTCGAGAGTCTCAAAGTGAATAGTCTGGAACAGCTGACGATTAACATCGTGAATGAGAAGCTACAAGGATACATGAACGAATGTATATTCAAACGGGAGGTCGAGGTTTACCACGAGGAGGGAATTCTTATCAGGGACACCGCCTTCCAGAGTAACGATCTAATCATCGATGTGTTCATGAAGAGGAAATTGGGACTTTTGGATCTGATGGATGAGGAAGCCCGGCTCAAGCATGGAACAAACAAATCAATGGCAAGGAAATTATCAGAGTTTCATCGCGACAGCAAGGTGTATAAACTACACTCTGCACCGGATGCCCAGTTTGGGATAAACCATTTTGCTGGAGAGGTCTGGTACGACACTCGAGGCTTCATAGAGAAAAACAGGGATACACTGAGTAAGGATCTGATACAGTGTATGCAGCGGAGTGAGAGCGAGCTCGTCGGAGATCTGTTTAAAGCAACCAAGTCAAGCACAGGAGCAATATCACAATCAATAGCATTGATTCTCCAGCGGGTCCCTATGAACCAATTTTGTCGATTGTTGATGATTATCTATTTGATTATATTTGATTATAGGTGCATCAAGCCTAATGACAGACAGAGATCAAATGACTTTGATCGAACAAAAGTAAAAGAACAGCTGCGATATAACGGCGTTGCTGAGATCGCGAGGATCAGGAAATTTGGTTTCTCGGTTAGGAGGAGATATAGTGAATTTCTCAACCAGTTTTGGGAGTTAGCTCCCCTGAGCAAACTTGACACAGATAATGTCGAAGGAACAAAAAGAATTCTCAACTCAACATTTTCACCAGATGAACTGAAAGAGCAGAATAACAAATCACAGTTTGTGCCGACAGCAATCTCTGTAGCAATGATGTCGTCCCTTCCTGATGCTGATTATGATGATGATGAAAAGGAAGCGGCGGGCTTTTCAGATTTAAATGTTGATAAGCCAAACATCCGATCAAGAATTACTGAACCTAACAAGGATAATTCTGCAACCAAACCAAAATTCCTTCATCTATCGGACACTATTGTTAGACATGGGAAGGGTCCCAGCCCTGCTAGCACGCCATCGGACAGCCCATCGTCATCGGCAACCAATGGTGGTGGTGGTGCATACAATCATATCCCGCCTGTTGGGAATGAAAGGCCACAGACGAAATCACCTGATGGAAAAAATGCAGCTGACAATAAAAAAGAAGAGGCAGAAGTCAAGGAAGAGGAAGAAAGTACCGCTTTTTGGGACATATTTCAAATCATTGAACGAGAGAGAGAGACTGATGATGTCACGTCTCAGAAGATTCTGATTATGTTGAAGGCATTCCTCTATCTCGTCCTGTTTTCCATCCTCCTCATCTGCTGCGTCACTCAGAAAATCAGTCTCATGGTGCTTGTGTCGAGCTTCAGTGACCGCGATCCGACGAAAAACGTTAATGAGATAACAGCCAAGTACCTACTGGGTCTGATTGCTCTATGCATACCTTATGCCCTGGCGGTACTCTCCTGTATGTTCAAGGCTTTCTTCGGTGATTACACTACCCCAAAATGGAAAACATTCTTAGTGAGTTCTATAATGGAGACGGCTCACACGGCCGGATTGTGTATTCTCATATTTCGGATCCTACCACAGCTCGACATGATAACGGGGATCATGGTACTCAGTGCTACAGCTGTCATGCCAACGATACTTCGTCTACTCTGCACGTCGCTTGACTACACGGGCAAAAACAAACCGATCCCTAAAAAGATAGCATGGGTTGTTATAGATTTCATATCAATGATTGCGCAACTTTCTGTTTTTCCTGTTCTGATTATGTCCGATAAAATCTGGACGGGACAAAAAGCATACAGCGACAACGCAATTCTTAATACGGTTTATATTCTTTTTGCTTTTCTGTTAATCTCATTCTCATACTGGGAAAATTTCATGGATTTAAGACTTCTGGTGCCGTTGAGAAAATCAGGAACTTTATGTCAGGGATTATTGAGGATTAGATTCGAGCTTCAAGAAGGTCGACCCATGATGCAGATACTCATGAATCTATGGAAAATTTCTGTGTCTATAATTCTTGCATTTCTTCTTCGACCTTCCGTGATGGAGCATTTCAGCTTAACAGAAGCTTTCGATGAAATCGGACGTGAAAAAGAATTATCGTTGTACGCGTCAATTATTGTGCTAGCCATTGCCCCGTTTGTTGGACATTATACAGCAAAGACGGCATGTCGTCTCAGAATGCAGGCCATTTCTTTTTCGCTTCCACTCCTTTTGTCGACTCCTATAGCTATTGGTGCTGCTCTGATCCAGTGCAAGGAGTACAACTTTATTGGTATTATTTCCACAGAGACGAGATACTGTAGTACCGTCAATATCTATAATACATGGTGGGTTTTTCTGTTTGCTGCTGCTTGGTGGCTGTCCATTCATATTTGTGCACGATATATCTGGGATCCACAACAGGAGCGGCTGGCCAGTATTCACAGGTTGTTTGTGAACACGACATACTGCAACATCTTATTTGAAGAACAGCTAATGTTGAATCGACGTCGAGACACAAGGATTGTCGTAAGAGATGCGCTGGAAGAAGAAAAGTTGGTGTATTCTCTAGTCGCGATGACCGAGAAAGATGAGGATGATTCTACGTTGACAGACGATCCTCGTGAGGCTATCGGAGATGATAGGATCATCCCAATGATTTATGCATGTGGAACAATGTGGCATGAAACTAGAACTGAGATGGTTATGTTGCTCAAGTCCCTGTTTAGGATGGACAAAGAACATTTCTTTCGACAAGTAACACAGAACATAACTAAGAAGCCAGATAGAGATTTCTTCGACTTCGAAGCTCATATTTTCTTTGACGATTGCATGGAGTTAAACGACGATGAAGATTTTGTACCAAATCAATTTGTTAAGCAGTTTATCAACTGTGTAAACATTGCAGCAAGCTCTGTACACAAGCGAGTGATGGACATCGGTGACCCTATGAAGGTCATCACTCCATACGGCGGCCAGCTGGTCTGGCAGATGCCGGGAGGATGTCTCATGTACGTGCACCTCAAAGATAAAGTCAAGATCAAACACAGAAAACGTTGGTCCCAGGTTATGTACATGTACTATTTACTGGGATATCGACTAAACAAGATGTGTGAGACTAAGATTAATGAGGAGATAGAAAGCGGCGCTATGCAGAGAACTCAATTCACAAAGGGAGATGCTCTCAAGCTTCTCGATCGCAACGTCAGGAAATTGGTTCGTTATCTAAATCTCAATACAATTATACAGAGTTCATATGTGACCCGCCATATCAAATCCAGTCGTAAGTCGGGATTTTTTTACCCTGCTGACAACACCTTCCTCTTGGCTTTGGATGGAGATGTGGACTTCACACCAGGAGCTGTCAGGCTGTTGGTTGATCGAATGATGAAAAACGAGAAAGTTGGAGCAGCATGTGGAAGGATTCATCCAGTTGGTTCCGGGCCAATGGTTTGGTATCAGAAATTTGAGTATGCCATCGGACATTGGCTACAGAAGTCAGCAGAGCATGTTCTGGGGTGCGTTCTGTGCAGCCCGGGATGCTTCAGCTTGTTCCGTGGGTCATCGCTTATGGACAATAATATCATGAGGAAATACACACTGATGCCAACGGAACCGGTTCACTACCTACAGTATGACCAGGGTGAGGATCGATGGTTATGTACGCTGTTGATTCAACAAGGCTACAAAGTCGACTACTGCGCCGCTTCAGATGCATGGACATTCGCACCAGAAAACTTTGCCGAGTTTTTCAATCAGCGCAGACGATGGATGCCTTCAACGCTCGCCAACATCATGGACCTCCTCTCGGACTACAAGGAAACTGTTAAGCACAACACCAATATGAGCTTCCTATATGTCCTGTATCAAGCGATGCTTTTCTACTCGACACTGATTGGTCCAGGAACAATTATCATGATGATAGCGGGAGCGTTTGCGACAGTGTTCGGTTTAACACTTGTAAATTCGTATCTCATAGCTGTAATCCCTGCGGCATTCTATTTTGCACTGTGCATGAAAGCACCTTCAAATATTCAAATAACTGTGGCAGCAATATTAAGTGCCATCTATGCTTTCGTGATGATGATAGTGTTTGTTGGATCGATAATCATGGCGATTCAACAGTCTTTTTTCCATCCAAGTGTCATCTTTATGCTTCTACTGGCTTTTATATTCATAATGGCGGCAATTTTACATCCGAAAGAATGGACTTGTGTTTTACCCGGCCTCATGTATTTCCTGTGTATTCCATCCGGGTATCTGCTTCTTGTGTTGTATTCACTGTGTAACATGTATGTTGTATCGTGGGGTACAAGAGAGATCCCAAGGAAGAAAACGAAAAAGGAGCTCGCTGAAGAGAAGAAGTTGGCCGAGGCGAAGAAGAACGAAAAAAAGCAAGGGTTTTTTCAAAAATATTTCTTCAACAATCAAGTTGAACAGTTGAAAGATATTGTTAGTAAGGTATCACTACCATCTCTTGGAAAAAATGACGATGTCGTGAATCTGCTGAAGGACATAAATGATAATTTGAAGCGACTTGGTGATAAGATTGGAGTCTCGACTGAAAAACATGATCCCTCTATCGCCAAGCGACCTTCAATGAAGGTCACATTCAAAGACACTACCGACACAATTATTCCTGATGAACTTGACTATGATGAAGTTGACTGCGATGAAGCTGACGAGGCAGAGGAGGTCAAGTTCAAAGTGATCAGGGACGAGATGAGAAATCCAGCATGGTCTGAAGATAAATCACTTGGAAAAGAAGATACCATGATTGTCGAAGAGGAAGAGGCTCTATTCTGGAAGCAGCTCATAGCTAGATACTTGAAACCGTTAGAAAAAAATACGGAAGAGGAGAAAAAAATTAGAGCGAGTCTAATCGAGCTTCGCAACGGTGTTTGTTTTGGTATGGTTCTCGTTAATCTTATGTGGATTGCCATCAACTTTATGTTCCAATATAAGAAACCAACGGAATTTTCCGTTGAGTACAAATTGAAGGATGAAACTTACGAGATGAAAATTGAAGTACTCGGCTTGTTGTTTATCTTCTATTTTGTTCTGATATTAATAATTCAGTTTTATGGAATGGTGAGTCACAGGTGGGGAACATTCCTCCATCTGATTTCAATAACTAATATCAACTTTTTCCGTAAGCAGGAAATTGACCCCAAAATCGAAGCGCAACATCAAATGGAGGCCGTCATGAGAAGGTGCGAGAAAGTTTATCATGATGAACCCTCGGCTGATTACAGTGATGACGATAGCGACGGGGACTCGTCAGAGACTGACGTGACAGCGATTGACAGAAATCGTCATCCATCAGTTCCGTCTATGTCATTGAGTAAAAGCATAAAGGATTTGGGTAAACATGGCTTCAGGAGGGGCCCAACATCCTTCATGTTCCAAAATGGTATCAATCCTAGGGATTTGTCACGCTCTAAAAAGTTAAGTGAAAATAAAAATTTCCAGGAGATGATAAGAGACGATCCGCCCCCAATTCCTCGCCGAGACGAAATGAGTAATTTCTCTAATTTCGCCGCACGCCATACGAGAAGGCCGACACGGGAGGCAAGTAATCCTGCATGGTTCGGAACTGTGACAAGAAGGACTATGAAAAACATGATGTCACATGATGGACGAAGAATGGGAACCCAACGTAGGCCAAAATCATCCCAGAACATTAATGATGATCCTATTTATGATGAGATTCCAGCATCACGTATGGGTCAACAATTTTCACTGAACGTCTCCCGAATGACTAGGAATACAAGATACGAACCGAGGCATATCAGAAATCGCAGGTTTGGTCAGGACCACCTGCATTTGGGGGATTCCATGGAAGGGGCTTCCTCTGATCAAATGGCTCATCAGATCTTATTCCCTCTGGCCTTGGGGGCGCAGCTTGATGATGCCCCAGAATTTGAGGGGGTGACCTTGGACAGGCCATAG

Transcript

Sda_chr02g00446.1

Protein

Sda_chr02g00446.1

MADVEDISYLDNLDIDNVVDNIEKRFDRAEIYTRCGDILIAVNPFRDLGLYTTKNHEKHALESNTSSLQPHIFETATKAYRRLCDTKTDQVILVSGESGAGKTESTKYLVKHLMFLSGKGASSLHEKVIQVNPLLEAFGNAKTILNDNSSRYAKYLELKFATSGQLLGGKYINYMLEKSRIVNQGMSESNFHVFYALLLSGESNMLSRLNLLTPADYRITKQFKLSTPRTAVYKRWYTLIRKVFNLLQFDDDVKENLVMLACCGDSITKITFWEPHSANDRHTICRIALDIKNNMLSHFFAGEVIATNKSYAQAEDGRDALAKALYERLFGYVVKRINESLFPDDLCSDGGSISIVDICGFESLKVNSLEQLTINIVNEKLQGYMNECIFKREVEVYHEEGILIRDTAFQSNDLIIDVFMKRKLGLLDLMDEEARLKHGTNKSMARKLSEFHRDSKVYKLHSAPDAQFGINHFAGEVWYDTRGFIEKNRDTLSKDLIQCMQRSESELVGDLFKATKSSTGAISQSIALILQRVPMNQFCRLLMIIYLIIFDYRCIKPNDRQRSNDFDRTKVKEQLRYNGVAEIARIRKFGFSVRRRYSEFLNQFWELAPLSKLDTDNVEGTKRILNSTFSPDELKEQNNKSQFVPTAISVAMMSSLPDADYDDDEKEAAGFSDLNVDKPNIRSRITEPNKDNSATKPKFLHLSDTIVRHGKGPSPASTPSDSPSSSATNGGGGAYNHIPPVGNERPQTKSPDGKNAADNKKEEAEVKEEEESTAFWDIFQIIERERETDDVTSQKILIMLKAFLYLVLFSILLICCVTQKISLMVLVSSFSDRDPTKNVNEITAKYLLGLIALCIPYALAVLSCMFKAFFGDYTTPKWKTFLVSSIMETAHTAGLCILIFRILPQLDMITGIMVLSATAVMPTILRLLCTSLDYTGKNKPIPKKIAWVVIDFISMIAQLSVFPVLIMSDKIWTGQKAYSDNAILNTVYILFAFLLISFSYWENFMDLRLLVPLRKSGTLCQGLLRIRFELQEGRPMMQILMNLWKISVSIILAFLLRPSVMEHFSLTEAFDEIGREKELSLYASIIVLAIAPFVGHYTAKTACRLRMQAISFSLPLLLSTPIAIGAALIQCKEYNFIGIISTETRYCSTVNIYNTWWVFLFAAAWWLSIHICARYIWDPQQERLASIHRLFVNTTYCNILFEEQLMLNRRRDTRIVVRDALEEEKLVYSLVAMTEKDEDDSTLTDDPREAIGDDRIIPMIYACGTMWHETRTEMVMLLKSLFRMDKEHFFRQVTQNITKKPDRDFFDFEAHIFFDDCMELNDDEDFVPNQFVKQFINCVNIAASSVHKRVMDIGDPMKVITPYGGQLVWQMPGGCLMYVHLKDKVKIKHRKRWSQVMYMYYLLGYRLNKMCETKINEEIESGAMQRTQFTKGDALKLLDRNVRKLVRYLNLNTIIQSSYVTRHIKSSRKSGFFYPADNTFLLALDGDVDFTPGAVRLLVDRMMKNEKVGAACGRIHPVGSGPMVWYQKFEYAIGHWLQKSAEHVLGCVLCSPGCFSLFRGSSLMDNNIMRKYTLMPTEPVHYLQYDQGEDRWLCTLLIQQGYKVDYCAASDAWTFAPENFAEFFNQRRRWMPSTLANIMDLLSDYKETVKHNTNMSFLYVLYQAMLFYSTLIGPGTIIMMIAGAFATVFGLTLVNSYLIAVIPAAFYFALCMKAPSNIQITVAAILSAIYAFVMMIVFVGSIIMAIQQSFFHPSVIFMLLLAFIFIMAAILHPKEWTCVLPGLMYFLCIPSGYLLLVLYSLCNMYVVSWGTREIPRKKTKKELAEEKKLAEAKKNEKKQGFFQKYFFNNQVEQLKDIVSKVSLPSLGKNDDVVNLLKDINDNLKRLGDKIGVSTEKHDPSIAKRPSMKVTFKDTTDTIIPDELDYDEVDCDEADEAEEVKFKVIRDEMRNPAWSEDKSLGKEDTMIVEEEEALFWKQLIARYLKPLEKNTEEEKKIRASLIELRNGVCFGMVLVNLMWIAINFMFQYKKPTEFSVEYKLKDETYEMKIEVLGLLFIFYFVLILIIQFYGMVSHRWGTFLHLISITNINFFRKQEIDPKIEAQHQMEAVMRRCEKVYHDEPSADYSDDDSDGDSSETDVTAIDRNRHPSVPSMSLSKSIKDLGKHGFRRGPTSFMFQNGINPRDLSRSKKLSENKNFQEMIRDDPPPIPRRDEMSNFSNFAARHTRRPTREASNPAWFGTVTRRTMKNMMSHDGRRMGTQRRPKSSQNINDDPIYDEIPASRMGQQFSLNVSRMTRNTRYEPRHIRNRRFGQDHLHLGDSMEGASSDQMAHQILFPLALGAQLDDAPEFEGVTLDRP*

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00063	Myosin_head	Myosin head (motor domain)	Domain	Interproscan
PF03142	Chitin_synth_2	Chitin synthase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001609	Domain	Myosin head, motor domain	Interproscan
IPR004835	Family	Chitin synthase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029044	Homologous_superfamily	Nucleotide-diphospho-sugar transferases	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22914	CHITIN SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003774	Molecular Function	cytoskeletal motor activity	Interproscan
GO:0004100	Molecular Function	chitin synthase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006038	Biological Process	obsolete cell wall chitin biosynthetic process	Interproscan
GO:0016459	Cellular Component	myosin complex	Interproscan
GO:0016758	Molecular Function	hexosyltransferase activity	Interproscan
GO:0030428	Cellular Component	cell septum	Interproscan
GO:0071944	Cellular Component	cell periphery	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-