Detailed information of Sda_chr01g02151.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_chr01g02151.1COLLAGEN ALPHASda_Chr1159015868159071892+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF01607CBM_14Chitin binding Peritrophin-A domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000998DomainMAM domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP