Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
Sda_chr01g01144.1 | INTEGRIN BETA SUBUNIT | Sda_Chr1 | 88219284 | 88233506 | + |
CDS | |||||
Sda_chr01g01144.1 | |||||
Transcript |
Sda_chr01g01144.1 |
Protein |
Sda_chr01g01144.1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF07974 | EGF_2 | EGF-like domain | Domain | Interproscan |
PF08725 | Integrin_b_cyt | Integrin beta cytoplasmic domain | Domain | Interproscan |
PF18372 | I-EGF_1 | Integrin beta epidermal growth factor like domain 1 | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR012896 | Domain | Integrin beta subunit, tail | Interproscan |
IPR013111 | Domain | EGF-like domain, extracellular | Interproscan |
IPR014836 | Domain | Integrin beta subunit, cytoplasmic domain | Interproscan |
IPR015812 | Family | Integrin beta subunit | Interproscan |
IPR036349 | Homologous_superfamily | Integrin beta tail domain superfamily | Interproscan |
IPR040622 | Domain | Integrin beta, epidermal growth factor-like domain 1 | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR10082 | INTEGRIN BETA SUBUNIT | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0005178 | Molecular Function | integrin binding | Interproscan |
GO:0005925 | Cellular Component | focal adhesion | Interproscan |
GO:0007160 | Biological Process | cell-matrix adhesion | Interproscan |
GO:0007229 | Biological Process | integrin-mediated signaling pathway | Interproscan |
GO:0008305 | Cellular Component | integrin complex | Interproscan |
GO:0009986 | Cellular Component | cell surface | Interproscan |
GO:0016477 | Biological Process | cell migration | Interproscan |
GO:0033627 | Biological Process | cell adhesion mediated by integrin | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |