Gene detail

Detailed information of Sda_chr01g00704.1 in Siphonodentalium dalli Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Sda_chr01g00704.1	TREHALASE	Sda_Chr1	52057243	52198717	+

Gene Structure

More details in Jbrowse Sequence

CDS

Sda_chr01g00704.1

ATGCGTAACTTCTATGACGTCGTTAGAGGTCATAACGTCAAGAAACTCAAACAATATATGATAGCCGGAAATCTATTATATATTTTGGAAGATCTGTGTGTCTGTGTGTGTGATCGCGATGGACTCGAAAACGAACGAGCCGATTTCGATGAAACTTGCTATGCACTTTTGTCAACAGAAATATTCCCTCAGCCTTTTGATGGAGGCCGACTGACTATGAATACTGGCCTGAGCAGTCATTTCCAGCTAAGTCATACAATCACCTTGGGACCACAGCAGACGTCTGGATATAGGTTTGGAGCTACATACATAGGAACACATTACGGTCCCCAGGAGGCATACCCACTGTTATTAGGAGATATTGATCCTAATGGAAATCTAAATGCCAACCTTATACACTCATTAACAGATAATATATTCATCAAATGTAGAGCACAAATTCAGAATAATAAATTAGAGGGATCCCAGGCATCAGTTGATTACAAAGGACAAACTTTCACTTCATCACTAACAGCTGGAAATACAGACCTTCTCAATAATTCTGGTATCCTTTTAGCACAGTATTTACAGAGATGCACGAGTAACTTGAGTATAGGATCCGAGCTTATGTATCAATATGGACCAGAGGCTCCAGGTGGAGAAATGGCAATCTGTTCCTTCGGTGGCAAATTAACAGGCGATAAATGGGCATTCAGCGGTACAGCAGTTCCAAGTGCCGGGGGCCTCCATGCCTCTTATACCCACAAAATCACTGATAACCTACAACTGGCAGCAGAATTAGAGACAAGTCTGGCTATGCAAGGCAGTGTGGCAACAGTCGGATACCAGATTGATCTACCATCAGCTGGTGTAGTTTTTAGAGGGCAATTGGACACAAACTGGTCTGTGGGCTCAGTGTTAGAGAAGAAGCTGCAGCCACTGCCGTTGACACTAGCTCTTAGTGCCTATGCAAACCATAGCAAAGCCAGCTATATATTTGGTCTAGATGGTGCAGCTTTGGTGGTGACGAACGGATACCGGAAACGGGACATGGATTATATAATCGATCAGCGAACCAAACAGGTTTTCCTGCATGGACCAGTGCTAGAAGGCGTTCAAGAGTCCAAGCTATTTGAAGATGAGAAGGATTTCACAGACATGAACATGAAAGTTGACCCAGATGTGGTGTTGGGCGCCTTCGGTCGTATGCTGAAGGAAATTGAAGGAAAACCGCCTTCTATGGAGCAAGTCAGGCGATTTGTTGAAGAATATTTTGAGGGACCGGATGCCGATATCGAACCATGGACACCCACCGACTGGAAAGAAGATCCAACTGTTTTGAAAAATATCACAGACAAAGACTTACAGGAGTGGGCCACTCATTTGAACAACATATGGCCTAAGCTGTGTAAGAAGATCAAGCCACGAGTGAAGGAGCATCAAGAGCGATACAACCTCATACATCTACCAAACCCGATTGTTGTTCCTGGCGGCAGGTTCAGGGAAATGTTTTACTGGGACACATATTGGACGATGGAGGGTTTGCTGTTGTGTGAAATGTTCGAAACTGTGAAGGGATTACTGCTGAACTTCGAACACCTAATAAACAAACTTGGACATATTCCGAACGGCAACAGATTCGCATTCGCAGAACGATCACAACCACCATTTATATGCTTGATGATTGAAACCTACGTCGAGAAAACTGGAGATGTTGAGCTTTTGGAGAAATTCATGCCTGCGTTAGAGAAGGAATATGCTTTCTGGACCAAACACCGCAGTGTGCCGGTTGATGTCAATGGAACCACCCACAGAATGTATAGATACTGGTCAGAGTACACATTCCCGAGACCCGAAAGCTACTCAGCCGATGTGGAGAGTGCAGAGAGTGTCACAAAAGATATGCACTCACAGCTGTTCCGAGACATCAGAGCGGCCGCTGAATCCGGCATGGATTTCTCTTCCCGATGGATTCCGAACTTTGATGCAAAAACCAGCAAACTTTGTGATATGAGAACCACCGACATAGTTCCAGTATGCCTCAACAGCCTGCTTTGCATGAATGAACATTTGATATCTACGTTTTTCGAGAGGTTAGGGGACACGGCTAAATCTACTGAGTACAAGAGGAGACACGAAGAGACCAAACGGGCGATTCGTGATGTTTTCTGGGACGATAAATCTGGTGTGTGGTTCGATTACTGTCTCTCGTCAAAATCGTCCATCAAACGATTCTACCCATCGAACGTATATCCAGTATTCTGCAAGTGTTATTACGAAAATGAGGACGATAAGATAGCGACAGAAGAGAAGGTCCTTCGGTACTTGAAGGACTGCGGGTGCTTAGATTACATTGGTGGAGTTCCGACGTCACTCTCGGAGACGGGCCAGCAGTGGGACTTCCCCAATGCATGGGCTCCGCTTCAGCACATCGTGACGATGGCCTTGCATTCCATGAAGTCCGACGAAGCGAAAACCAAAGCCAAAGATCTGGCATCGCATTGGCTGAGAAATAATTACAAAGCTTGGAAATCTAGTGGTAACATGTACGAAAAGTATGATGCATCTAAAAGTGGTGAGCGAGGATTCGGTGGGGAATACAAAGTACAGGCTGGATTCGGATGGTCAAATGGAGTTGTCCTGAGCTTCATATCCACATTTGGTGCCGACGTCAGTATGCATTCTTGA

Transcript

Sda_chr01g00704.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01204	Trehalase	Trehalase	Repeat	Interproscan
PF01459	Porin_3	Eukaryotic porin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001661	Family	Glycoside hydrolase, family 37	Interproscan
IPR008928	Homologous_superfamily	Six-hairpin glycosidase superfamily	Interproscan
IPR012341	Homologous_superfamily	Six-hairpin glycosidase-like superfamily	Interproscan
IPR018232	Conserved_site	Glycoside hydrolase, family 37, conserved site	Interproscan
IPR023614	Homologous_superfamily	Porin domain superfamily	Interproscan
IPR027246	Family	Eukaryotic porin/Tom40	Interproscan
IPR037930	Family	Tom40	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23403	TREHALASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004555	Molecular Function	alpha,alpha-trehalase activity	Interproscan
GO:0005741	Cellular Component	mitochondrial outer membrane	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0005991	Biological Process	trehalose metabolic process	Interproscan
GO:0005993	Biological Process	trehalose catabolic process	Interproscan
GO:0008320	Molecular Function	protein transmembrane transporter activity	Interproscan
GO:0030150	Biological Process	protein import into mitochondrial matrix	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-