Gene detail

Detailed information of Sda_chr01g00286.1 in Siphonodentalium dalli Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
Sda_chr01g00286.1	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 221	Sda_Chr1	27131197	27193441	+

Gene Structure

More details in Jbrowse Sequence

CDS

Sda_chr01g00286.1

ATGCCTGCGGCCGGTACTATGAACAGGGCCATTAAAGGCCCTGTCTCCATCAACACCCGCAATCGTGGGGAAGGGTTGTTGATTGACACAATGCAACTTGTCGAGCCAAGAAAATCACAGAATGTGCCAAACCACATTTTAGAAACAAAAATATATTCTAAAGTTGCACAAAACTCAGTGATCCAATCTCGGCCAGCTGTTATTCATTTTTCGGGGTTTGATGTAGAAAAGAAATTTGTACAGACTGTGAGCATTGTAAATGCATCAACAGATGTGATTCGCCTACATATAATACCACCACAGACCAAGTATTTCTATATAAACTATAACAAAAATGTGCGAATGGTTCCTGGACTGTCTTTGGATTGTACAATTGAGTTTGTTGCCGATGAGTTTCGATACTACTATGATTGCATTAAAATACACTGTCCGGGAGAAGACAACCTGGTTATCCCGATTCATGCTTATCCCGTTATGGATGCGGATAGCTTTCCATCCCATCTCACATTCGCTCCAGTACCTATTGGACACAAATCCACCAGGATTATTCCTCTCAAATGCGATGCACCCGTCGACTTTGAATATCATATTTCATATATCCAGCCTCATCAGAGCTTCTCTGTTCAGCCAATGACAGGTATTGTGCCGGCTCATGGCGAAGCAGAAGTTTGCGTCACATTCTCTCCATCTGAATTTCTCACAGCTCATGCCAAAATACAGCTCATCATCTCACAATTCAATAGTAAATCATTTGTATGCTCTATAACAGGGACGTCTATCCCAGGACTCTTAAAGGATAAAACAGTAAAAGAAGGTGAAACGGCCAATATAACGTCTGAAATTCTGGATCCAAGGTGCTTAACTCCGCTTGAAAGGAGTCGAAAGAAGAGGAAAGTAAACAGTGCTGAAATGAAAATTCCAGAACCCCCAAAGGACATTGAGTACAAAGGAGTGAAGTTTCCTGCAGCGCTAGACACGCCGTTTGCTGTGTCACAAGTCCTCAACCAACAGACCGGCAAACTGCTAGCAAAGGATATACATGAAGCTGTTGCCAAGAAAGCAGCTGTCCCGAATTCTCAAGCCACAAGGCAAATGAAGGAAGCTCAGTTTGAACACAGTGTTAGAGAAAGTGTTTACGAGGAAAGGCAAAACCAACTACGGTGGCAGAAGAAACTCGGAGATGACCCGATGTCAAACAGAGCGAGAATGGATGTAATCGATCATCGAGCTCAAGCTTTAGATGAATACAAGTATGGGCGATGTGGTAAACCGATTCCAGAGAGTGAATACGTGAGAAGCAATACGAGCTCCGTCTTCAAGAGGACAATAAGAGAATGTACACAGCTTGCTCCGGATGTAGCCCGGTTTGATGAATACACCAATGACCTTTGGTCAGTGCGGCATAGGGCATTAAACAGATTTTGTCAAGCTGCCAGAAAATTAATCATTAGACTTAGAGCTAATACCCGTCTGGCATCTTTGAAAAAAGTTGTTCTTGATTGGAGACAGAAGAAGTTCGCCACTGAAGGACTTACTGTTGAACAACAACAGAAAATTGAACAAGAACAGCAATCGAAGGATCAATTAGAAACGGTATTCACCGACGATAAAATCAAACATTACCAGTTTGTTACATACGCCACTCCAAATGTCAAGGATGATATGGCGCCTGATGCTTTGGGTGTTGTTCCATTCAAGCCGACTGATGTTCAAGTAAAAAGGAAGGTTCCTTATTTTGCCTTGAAGGTTCCCCAGGTGTATCGGCTGATGGGTTATGAGAGGCATAATGTGCATAATGCATCCAGTGGCTACGAACCACCTAAAGTTGTACGACCACTACGGACAGGCGCAGAGGAAGAGATAATTTCCTTGCCGTCATCACAAGTTTCGCCGTCTGTTCCTGATGCCGTCGATGAGGGAGATATGGCCCTGGTAGACGTGGCTGACGAGAGTGTCCCAGTAATGAAAGAAGATGCACAACAGTTGGCTTTAACACCCCCAGAAGCTTTATTCCAAGCCATTCAGTATCCAGCGCTGCACATATTTAATCCTGCACCAGGTCTTCAGGTTTTCCAGTCACCGATGCCGTACGCCGAGGTCGATCCAGACTTCCATCTTTGTCCTCTACCACGATACTTCCCCAAAAGCAAAGAGTTTAATCCACATTACTCAACACAAAAACGCTATCTGGACAGGGAGGACATCATCAAAGGCATCATGGCCTGGAAGAAATTTCCTTCGCAAGGTCTGATGTCTCTCTCAAATATCCCAACTCTCTCAAATGTCTGGGTCCCTCGCTGGGATGATCCATTCAGCACCGACTTGATTCCCGAGGATATCCCGTCTCTCTTTGATGAGATCGATGAAGTTGACTTGGAAAATATTCTTGATGACGAAGATGAAGAGACAGAGGTCATCGATCAAAAAACTAGTGTAACTTTAACCCCAGAAATGGTGAATAGTCAGTTCACCCTCATCGACCCGTCTGCACCACCACCAGATGAGAAACAACCAGG

Transcript

Sda_chr01g00286.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14874	PapD-like	Flagellar-associated PapD-like	Domain	Interproscan
PF15780	ASH	Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR029676	Family	Cilia- and flagella-associated protein 221	Interproscan
IPR031549	Domain	Abnormal spindle-like microcephaly-associated protein, ASH domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46500	CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 221	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003341	Biological Process	cilium movement	Interproscan
GO:0005929	Cellular Component	cilium	Interproscan
GO:0044458	Biological Process	motile cilium assembly	Interproscan
GO:0060271	Biological Process	cilium assembly	Interproscan
GO:0097729	Cellular Component	9+2 motile cilium	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-