Detailed information of Sda_Sca01175.1 in Siphonodentalium dalli Gene info
Gene IDAnnotationChromosomeStartEndStrand
Sda_Sca01175.1DNA GYRASE/TOPOISOMERASE SUBUNIT Bptg000737l334643338846-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00204DNA_gyraseBDNA gyrase BDomainInterproscan
PF00485PRKPhosphoribulokinase / Uridine kinase familyDomainInterproscan
PF01118Semialdhyde_dhSemialdehyde dehydrogenase, NAD binding domainDomainInterproscan
PF01751ToprimToprim domainFamilyInterproscan
PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan
PF02774Semialdhyde_dhCSemialdehyde dehydrogenase, dimerisation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000534DomainSemialdehyde dehydrogenase, NAD-bindingInterproscan
IPR000565FamilyDNA topoisomerase, type IIA, subunit BInterproscan
IPR001241FamilyDNA topoisomerase, type IIAInterproscan
IPR003594DomainHistidine kinase/HSP90-like ATPaseInterproscan
IPR005986FamilyAspartate-semialdehyde dehydrogenase, beta-typeInterproscan
IPR006082FamilyPhosphoribulokinaseInterproscan
IPR006083DomainPhosphoribulokinase/uridine kinaseInterproscan
IPR006171DomainTOPRIM domainInterproscan
IPR012080FamilyAspartate-semialdehyde dehydrogenaseInterproscan
IPR012280DomainSemialdehyde dehydrogenase, dimerisation domainInterproscan
IPR013506DomainDNA topoisomerase, type IIA, subunit B, domain 2Interproscan
IPR013759Homologous_superfamilyDNA topoisomerase, type IIA, subunit B, C-terminalInterproscan
IPR013760Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR018522Conserved_siteDNA topoisomerase, type IIA, conserved siteInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR034160DomainDNA gyrase subunit B, TOPRIM domainInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45866DNA GYRASE/TOPOISOMERASE SUBUNIT BInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003918Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0004073Molecular Functionaspartate-semialdehyde dehydrogenase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan
GO:0008652Biological Processamino acid biosynthetic processInterproscan
GO:0008974Molecular Functionphosphoribulokinase activityInterproscan
GO:0009086Biological Processmethionine biosynthetic processInterproscan
GO:0009088Biological Processthreonine biosynthetic processInterproscan
GO:0009089Biological Processlysine biosynthetic process via diaminopimelateInterproscan
GO:0009097Biological Processisoleucine biosynthetic processInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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