Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
Sda_Sca00185.1 | TRANSCRIPTION TERMINATION FACTOR RHO | ptg002386l | 11961 | 13881 | + |
CDS | |||||
Sda_Sca00185.1 | |||||
Transcript |
Sda_Sca00185.1 |
Protein |
Sda_Sca00185.1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00006 | ATP-synt_ab | ATP synthase alpha/beta family, nucleotide-binding domain | Domain | Interproscan |
PF00085 | Thioredoxin | Thioredoxin | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000194 | Domain | ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain | Interproscan |
IPR003593 | Domain | AAA+ ATPase domain | Interproscan |
IPR004665 | Family | Transcription termination factor Rho | Interproscan |
IPR013766 | Domain | Thioredoxin domain | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR036249 | Homologous_superfamily | Thioredoxin-like superfamily | Interproscan |
IPR041703 | Domain | Transcription termination factor Rho, ATP binding domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR46425 | TRANSCRIPTION TERMINATION FACTOR RHO | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0005524 | Molecular Function | ATP binding | Interproscan |
GO:0006353 | Biological Process | DNA-templated transcription termination | Interproscan |
GO:0008186 | Molecular Function | ATP-dependent activity, acting on RNA | Interproscan |
GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |