| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| Sda_Sca00019.1 | NUCLEAR HORMONE RECEPTOR HR3-RELATED | ptg002315l | 766 | 37371 | - |
| CDS | |||||
| Sda_Sca00019.1 | |||||
| Transcript |
| Sda_Sca00019.1 |
| Protein |
| Sda_Sca00019.1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00104 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor | Domain | Interproscan |
| PF00105 | zf-C4 | Zinc finger, C4 type (two domains) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000536 | Domain | Nuclear hormone receptor, ligand-binding domain | Interproscan |
| IPR001628 | Domain | Zinc finger, nuclear hormone receptor-type | Interproscan |
| IPR001723 | Family | Nuclear hormone receptor | Interproscan |
| IPR001728 | Family | Thyroid hormone receptor | Interproscan |
| IPR013088 | Homologous_superfamily | Zinc finger, NHR/GATA-type | Interproscan |
| IPR035500 | Homologous_superfamily | Nuclear hormone receptor-like domain superfamily | Interproscan |
| IPR044101 | Domain | Retinoid-related orphan receptors, DNA-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45805 | NUCLEAR HORMONE RECEPTOR HR3-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0004879 | Molecular Function | nuclear receptor activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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