| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g9483 | NUCLEOPORIN NUP84-RELATED | HiC_scaffold_3 | 46999910 | 47031864 | - |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00045 | Hemopexin | Hemopexin | Repeat | Interproscan |
| PF00413 | Peptidase_M10 | Matrixin | Domain | Interproscan |
| PF01471 | PG_binding_1 | Putative peptidoglycan binding domain | Domain | Interproscan |
| PF10168 | Nup88 | Nuclear pore component | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000585 | Domain | Hemopexin-like domain | Interproscan |
| IPR001818 | Domain | Peptidase M10, metallopeptidase | Interproscan |
| IPR002477 | Domain | Peptidoglycan binding-like | Interproscan |
| IPR006026 | Domain | Peptidase, metallopeptidase | Interproscan |
| IPR018487 | Repeat | Hemopexin-like repeats | Interproscan |
| IPR019321 | Family | Nucleoporin Nup88 | Interproscan |
| IPR021190 | Family | Peptidase M10A | Interproscan |
| IPR024079 | Homologous_superfamily | Metallopeptidase, catalytic domain superfamily | Interproscan |
| IPR033739 | Domain | Peptidase M10A, catalytic domain | Interproscan |
| IPR036365 | Homologous_superfamily | PGBD-like superfamily | Interproscan |
| IPR036375 | Homologous_superfamily | Hemopexin-like domain superfamily | Interproscan |
| IPR037700 | Family | Nucleoporin NUP88/NUP82 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13257 | NUCLEOPORIN NUP84-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000055 | Biological Process | ribosomal large subunit export from nucleus | Interproscan |
| GO:0000056 | Biological Process | ribosomal small subunit export from nucleus | Interproscan |
| GO:0004222 | Molecular Function | metalloendopeptidase activity | Interproscan |
| GO:0005643 | Cellular Component | nuclear pore | Interproscan |
| GO:0006406 | Biological Process | mRNA export from nucleus | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0006606 | Biological Process | protein import into nucleus | Interproscan |
| GO:0006913 | Biological Process | nucleocytoplasmic transport | Interproscan |
| GO:0008237 | Molecular Function | metallopeptidase activity | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0017056 | Molecular Function | structural constituent of nuclear pore | Interproscan |
| GO:0031012 | Cellular Component | extracellular matrix | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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