| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g5299 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN | HiC_scaffold_2 | 6653078 | 6665055 | + |
| CDS | |||||
| SQW42HX01_g5299 | |||||
| Transcript |
| SQW42HX01_g5299 |
| Protein |
| SQW42HX01_g5299 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF13359 | DDE_Tnp_4 | DDE superfamily endonuclease | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR027806 | Domain | Harbinger transposase-derived nuclease domain | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR053134 | Family | RNA-directed DNA polymerase homolog | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24559 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| - | - | - | - |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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