| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g37807 | TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL | HiC_scaffold_22 | 19811665 | 19818656 | - |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00579 | tRNA-synt_1b | tRNA synthetases class I (W and Y) | Family | Interproscan |
| PF04051 | TRAPP | Transport protein particle (TRAPP) component | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001412 | Conserved_site | Aminoacyl-tRNA synthetase, class I, conserved site | Interproscan |
| IPR002305 | Family | Aminoacyl-tRNA synthetase, class Ic | Interproscan |
| IPR002306 | Family | Tryptophan-tRNA ligase | Interproscan |
| IPR007194 | Family | Transport protein particle (TRAPP) component | Interproscan |
| IPR014729 | Homologous_superfamily | Rossmann-like alpha/beta/alpha sandwich fold | Interproscan |
| IPR016721 | Family | Bet3 family | Interproscan |
| IPR024096 | Homologous_superfamily | NO signalling/Golgi transport ligand-binding domain superfamily | Interproscan |
| IPR024109 | Family | Tryptophan-tRNA ligase, bacterial-type | Interproscan |
| IPR050203 | Family | Tryptophan--tRNA ligase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43766 | TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0004812 | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0004830 | Molecular Function | tryptophan-tRNA ligase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005739 | Cellular Component | mitochondrion | Interproscan |
| GO:0005759 | Cellular Component | mitochondrial matrix | Interproscan |
| GO:0006418 | Biological Process | tRNA aminoacylation for protein translation | Interproscan |
| GO:0006436 | Biological Process | tryptophanyl-tRNA aminoacylation | Interproscan |
| GO:0030008 | Cellular Component | TRAPP complex | Interproscan |
| GO:0048193 | Biological Process | Golgi vesicle transport | Interproscan |
| GO:0070183 | Biological Process | mitochondrial tryptophanyl-tRNA aminoacylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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