Gene detail

Detailed information of SQW42HX01_g31052 in Zoroaster sp. YZ-2022 Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SQW42HX01_g31052	METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE	HiC_scaffold_17	936183	940084	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SQW42HX01_g31052

ATGTGTTCTGGCGCGTGGTCAACAGAGTATCTGTCATCTCTGCAAAAGCGGCAGAAGTGGTTGTACCCACAGCGTAACATGCACAAAGGCGACCTGGTACTAGTTAAGTACGACAGCTCACCTCGAAACCAGTGGCCACTAGGTCTGGTCATTGATGTCTACCCAGGTAAAGACGGCAGAGTCAGGACTGTCCAGGTGAAAACAAGATCCGGCATATACGACCGACCTACGGACAAACTCTGTCTACTAGAGGGAGAGGATATGACACAGTAGAGCAGATTGCCTCCAGGAAGAGTACAATTAAGAACGCTTTCACCCTTTAAAAATGGACATCTTCATTTGACTGTTAGGATATTTTTGTCGCATTTTTGGTTTATTTTTGGTAATTCCCCTATAAGGTCATTAGGGGCCGGGATGTTGCGGTCAAAACATCCTCCAATAAATGTCCTCTCGTAGGCATAGTAGTTTGCCTGCAGTCAATAGAGGGCGCACGGCACTCGGCAAAATGGTCAGATAAGTCAGTTTGTTTTAGACATAGTTTATGCGCGTATCGTGACAAAACATTCTTTATTTTTCCTTTGATTTTGTTAAGTTTGTCAGCTCAGCAAAGTGAGTACTTTCTTTATAAGTTTAACCTTAATAATTGCCTAAAGATAAAGGCAATAGACAAATTTAACCTGTTAAATTGTGGCAAAACAATTAGGCATGTTTTTGTGTTTTGAAATGTCCGAGTTTTGGGCAAGTGCCTTTCAAGTAAAGCGTGTACATGTATTTTTAGTACAAGATAATGTTGCACTTGTGTTGGGCACTAGATATCAGTGTGCTTTTAACTACACGTTGTGGTCCAGAATTTATGACCTGCATTTGTGACGGTGGCATAAGTTTTCATAATTTATCATTTTGTATTGTTTCAGTCGAACCATCAAAATCATCAAAACCGTCAAACCCGTCAATCCGTCATCCCTTGGAACTGTTAGATACGCCAAATTACATCATACCGTCAAGGTGTCTTTGTCGTCATTATTAAGGACCCCAAGATCTCTTACCTAGAGATCACTTGAGACATTAGACATCATTGTTTGTGATACATCGCCACCAGCATTTATTGTTCCTATTGTCACCACTCAAGACATATTAAAGAGATTTTGAGGACAAGAAAACATTGTGTGTAGTTGATGAGTATTGATTGCTGAGTAAACGACAGTAGTTGGCAATAAGTAGCGTGGATGCTACACAGCCCATAATTGTAAAATTAAAAGTGGATTTTAAAAATAGTTTACGCTTTATGTACCCCGAAAAATCGATACTAGTTAGTGGCTGCAAAAAAATTCCCCAAAAAACCTTTAAAAGTGGCGGTCGGATACGACATTCTACCCTGTTCTCCACCTTACTGGGTAGGTAAGATTACATTATTGGTTATATTAAATGAGAAAGTGGCGGTCAGATACGACATTCTTTCCATTTATTTAAAGTACATGTACTACATTCTTGAATTTGTTCAAATTCTTTTGTTTACCCCAGTTTTAAATTTGAATGAATACATTGTTTTTGTGCAGCTTGGGTAATGTGCCACACTGCAGGCCATGACACTTTACAACATTATGTCAGTGATGATTGCTGTATGACCAGCAATGATGGCAAAAACAGGGTGTAGGGTCTGTGGTGGTGGTGGTGGTGGTGGGAGGGGAGGGAGGAAAGGGTTGGTGGGGGACCGTACTCAAGTTCCCTCAGCCCTATGTTCCCTCATCCCAAAATAGACCCTATGTTCCCTCAGCCCTATGTTCCCTCATCCCAAAATAGACCCTATGTTCCCTCAGCCCTATGTTCCCTCAGCCCTATGTTCTCCCATCCCAAAATAGACCCTATGTTCCCTCAGCCCTATGTTCCCTCAGCACATATGGCCCTTCCATAATGTGCTGTTGGGGTCACCTGTTACAACATTTATAATGCATTATAATGCGCTTGTAAGGCGTCTATAGGGTCTATTTTGGGATGAGGGAACATAGGGTTGAGGGAACATAGGGCTGAGGGAACATAGGGCTCAGGGAACATAGGCATGACCCCGTTGGTGGTAGCCTGGTTGGTGGAGAGTATACATAACTCACAGACTATTGTTATTACTGAGTACTGGTCATTGGACTGTCCAGTTGTTTATAATAGTGTAATTTATATAGGATAATTTATTTACATTTAATTTTGGGCAAAAAACAACTGGCATGTGAATCCACTTTTCCATCATTTTGGGTTGAGCTCATTAAGGGTTTTAAAAAACAAACTTTCTGGTCAAATATCAAAACACACAGACTATGCGTCTTGAAGTAAAAAAAAAAAAAACTGTTTTTCTCAATATTCCTTACAGATAAGAAAATGAATATGAGTGCTGTTTGCAAGAGATGTACAGCAGTTCTTCAAACACCAATTGGCCCAATAAGTATAACGGCATGTGAGACAGGAGTCCATGCCATCAAGTTAACAGCAGCAATTGAACTACCAGATATCACTCAAAGGTACATAAATCACTGATTTTCTGACTGAAAGAGGGTCATGCACATACACTGTACATTTGAAGCCACTGGATGCCATGTTGCCACCCATTGCAATGCTAACAGGGAGAATCAACCTCAACAATGTGCATGCTCAGTACTTTAATATTTGAACAACCACGGCTGAAAAACTTGTCAGTGGTTCAATCCTGTGCTTTGCTCAAGTTTAGGTCAAAACATTTCACCCAGCAAAGCAACTACGCCAAGTAGACTGGTTCCAAATAGTTGGATTATCAACTAGACAGGGTTTGGGTCAAGTTAGTCTAACTATAGTTAACCATAGTTTGCAGTTGAACTTGCTCTAGGCTGACCCTGAAGTCAGTGTGATAGGGATTGATACATGCTTGGAGGGTAGACCTTAAAGAGTGACCTCCCAGGACATTGCATGTAGTTGTGTTTCTTCTTTAACAACCTAACTTTATTTCCACAGGGTAACCATGGCAATCACAGAGGAACCAGAGCACTGGCCAGCTGCTCTGAAGGAGTGTGCTGATTGGCTGACAGTGTACTTCAAAAATGCTAAAGCAGCCTATCGCAAACCTCTGCCTGCATTTCACAGGCCGGATACAAGGAAAGGTTGGTTCAATAACAATCTAGTTTTGCAGGTTTGATCCCCTGAATGCTCAGTTTTACATGAAACTTTCTTGCTGTTATAAAGTTGATGATTTTATCAAGTATCCCTTGAAATAGTTTTGTCTCAGATGTTACCGTTGAATTAAAATTAAAGGAATAATCACCAAAATTAAACTCTTGTCATCCGAAGACACAAATTCCACACTGGAATGAATACAAACAATCTGAATGCATTTTCACTATTTTCTCTTCAACGACACAACGCAATAAGCTGCTACAGTCACAAGTTGGTTTATAAACATACCTCTTGATTCTTAAAAGTAACAATGTATGTACAGACTTTATACCATATATACTGGCTCTAACAATAGCTTGTTCCTAGCACCAATGTGTTGTATGGGTCAGTTGATCAATATTTCTTCTAAATTTAATTATGAAACATATTGGCAAATTCATTGAATTCTTTTCTAAAGGAGAAAAACCTCAGCTGATTAATGTATTTTATCTCACTTTTAAACAGATTCTTTCACCTACAAAGTATGGGAGACGCTGACAAACCAAGTGCCTTGTGGGGAGACCGTCTCCTATGCACAACTAGCAGCCATGGCTGGAAACGACAAGGCATGTCGTGCTGTAGGGGGCGCTATGCGGGCCAATCAGATTCCGATTCTGATGCCTTGCCACCGAGTGACCACAAGCGGAGGTGCCCTGGGCAACTACATGTCAGGGAAGGGCAACGTTTTGAAGAAATGGTTGCTTGACCATGAGGGCGCTACAGTCAAATAGATGTGTTCTGGCGCGTGGTCAACAGAGTATCTGTCATCTCTGCAAAAGCGGCAGAAGTGGTTGTACCCACAGCGTAACATGCACAAAGGCGACCTGGTACTAGTTAAGTACGACAGCTCACCTCGAAACCAGTGGCCACTAGGTCTGGTCATTGATGTCTACCCAGATAAGAAAATGAATATGAGTGCTGTTTGCAAGAGATGTACAGCAGTTCTTCAAACACCAATTGGCCCAATAAGTATAACGGCATGTGAGACAGGAGTCCATGCCATCAAGTTAACAGCAGCAATTGAACTACCAGATATCACTCAAAGGGTAACCATGGCAATCACAGAGGAACCAGAGCACTGGCCAGCTGCTCTGAAGGAGTGTGCTGATTGGCTGACAGTGTACTTCAAAAATGCTAAAGCAGCCTATCGCAAACCTCTGCCTGCATTTCACAGGCCGGATACAAGGAAAGATTCTTTCACCTACAAAGTATGGGAGACGCTGACAAACCAAGTGCCTTGTGGGGAGACCGTCTCCTATGCACAACTAGCAGCCATGGCTGGAAACGACAAGGCATGTCGTGCTGTAGGGGGCGCTATGCGGGCCAATCAGATTCCGATTCTGATGCCTTGCCACCGAGTGACCACAAGCGGAGGTGCCCTGGGCAACTACATGTCAGGGAAGGGCAACGTTTTGAAGAAATGGTTGCTTGACCATGAGGGCGCTACAGTCAAATAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01035	DNA_binding_1	6-O-methylguanine DNA methyltransferase, DNA binding domain	Domain	Interproscan
PF18701	DUF5641	Family of unknown function (DUF5641)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014048	Domain	Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding	Interproscan
IPR036217	Homologous_superfamily	Methylated DNA-protein cysteine methyltransferase, DNA binding domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036631	Homologous_superfamily	Methylated DNA-protein cysteine methyltransferase domain superfamily	Interproscan
IPR040676	Domain	Domain of unknown function DUF5641	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46460	METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003908	Molecular Function	methylated-DNA-[protein]-cysteine S-methyltransferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-