Detailed information of SQW42HX01_g29245 in Zoroaster sp. YZ-2022 Gene info
Gene IDAnnotationChromosomeStartEndStrand
SQW42HX01_g29245CULLINHiC_scaffold_152431564824369105+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|Cullin

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00888CullinCullin familyRepeatInterproscan
PF10557Cullin_Nedd8Cullin protein neddylation domainDomainInterproscan
PF13472Lipase_GDSL_2GDSL-like Lipase/Acylhydrolase familyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001373DomainCullin, N-terminalInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR013830DomainSGNH hydrolase-type esterase domainInterproscan
IPR016157Conserved_siteCullin, conserved siteInterproscan
IPR016158DomainCullin homology domainInterproscan
IPR016159Homologous_superfamilyCullin repeat-like-containing domain superfamilyInterproscan
IPR019559DomainCullin protein, neddylation domainInterproscan
IPR036317Homologous_superfamilyCullin homology domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036514Homologous_superfamilySGNH hydrolase superfamilyInterproscan
IPR045093FamilyCullinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11932CULLINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0030674Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0031461Cellular Componentcullin-RING ubiquitin ligase complexInterproscan
GO:0031462Cellular ComponentCul2-RING ubiquitin ligase complexInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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