Detailed information of SQW42HX01_g2542 in Zoroaster sp. YZ-2022 Gene info
Gene IDAnnotationChromosomeStartEndStrand
SQW42HX01_g2542SID1 TRANSMEMBRANE FAMILY MEMEBERHiC_scaffold_17037987870418389+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13965SID-1_RNA_chandsRNA-gated channel SID-1FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR025958FamilySID1 transmembrane familyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12185SID1 TRANSMEMBRANE FAMILY MEMEBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0005764Cellular ComponentlysosomeInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050658Biological ProcessRNA transportInterproscan
GO:0051033Molecular FunctionRNA transmembrane transporter activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP