Detailed information of SQW42HX01_g25419 in Zoroaster sp. YZ-2022 Gene info
Gene IDAnnotationChromosomeStartEndStrand
SQW42HX01_g25419SYNAPTIC VESICLE GLYCOPROTEIN 2HiC_scaffold_123739150237424170+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF03146NtAAgrin NtA domainDomainInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF13599Pentapeptide_4Pentapeptide repeats (9 copies)RepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR001646RepeatPentapeptide repeatInterproscan
IPR004850DomainNtA (N-terminal agrin) domainInterproscan
IPR008993Homologous_superfamilyTissue inhibitor of metalloproteinases-like, OB-foldInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR020846DomainMajor facilitator superfamily domainInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23511SYNAPTIC VESICLE GLYCOPROTEIN 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0016021Cellular ComponentmembraneInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0043113Biological Processreceptor clusteringInterproscan
GO:0043236Molecular Functionlaminin bindingInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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