| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g17026 | ZINC FINGER PROTEIN | HiC_scaffold_7 | 20780572 | 20807499 | + |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-C2H2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | Domain | Interproscan |
| PF02178 | AT_hook | AT hook motif | Motif | Interproscan |
| PF02494 | HYR | HYR domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR003410 | Domain | HYR domain | Interproscan |
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR017956 | Conserved_site | AT hook, DNA-binding motif | Interproscan |
| IPR036236 | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR050688 | Family | Zinc finger and ubiquitin peptidase domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24403 | ZINC FINGER PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| GO:0045944 | Biological Process | positive regulation of transcription by RNA polymerase II | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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