| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g15088 | PROLYL-TRNA SYNTHETASE | HiC_scaffold_6 | 18304305 | 18342071 | + |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00458 | WHEP-TRS | WHEP-TRS domain | Domain | Interproscan |
| PF00587 | tRNA-synt_2b | tRNA synthetase class II core domain (G, H, P, S and T) | Domain | Interproscan |
| PF03129 | HGTP_anticodon | Anticodon binding domain | Domain | Interproscan |
| PF09180 | ProRS-C_1 | Prolyl-tRNA synthetase, C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000738 | Domain | WHEP-TRS domain | Interproscan |
| IPR002314 | Domain | Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) | Interproscan |
| IPR004154 | Domain | Anticodon-binding | Interproscan |
| IPR004499 | Family | Proline-tRNA ligase, class IIa, archaeal-type | Interproscan |
| IPR006195 | Domain | Aminoacyl-tRNA synthetase, class II | Interproscan |
| IPR009068 | Homologous_superfamily | uS15/NS1, RNA-binding domain superfamily | Interproscan |
| IPR016061 | Domain | Proline-tRNA ligase, class II, C-terminal | Interproscan |
| IPR017449 | Homologous_superfamily | Prolyl-tRNA synthetase, class II | Interproscan |
| IPR036621 | Homologous_superfamily | Anticodon-binding domain superfamily | Interproscan |
| IPR045864 | Homologous_superfamily | Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43382 | PROLYL-TRNA SYNTHETASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0004812 | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0004827 | Molecular Function | proline-tRNA ligase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006418 | Biological Process | tRNA aminoacylation for protein translation | Interproscan |
| GO:0006433 | Biological Process | prolyl-tRNA aminoacylation | Interproscan |
| GO:0017101 | Cellular Component | aminoacyl-tRNA synthetase multienzyme complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
