Detailed information of SQW42HX01_g11572 in Zoroaster sp. YZ-2022 Gene info
Gene IDAnnotationChromosomeStartEndStrand
SQW42HX01_g11572VDJ RECOMBINATION ACTIVATING PROTEIN 1 RAG1HiC_scaffold_43694817936948856+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12940RAG1Recombination-activation protein 1 (RAG1), recombinaseFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR024627FamilyV(D)J recombination-activating protein 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR11539VDJ RECOMBINATION ACTIVATING PROTEIN 1 RAG1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0002250Biological Processadaptive immune responseInterproscan
GO:0002331Biological Processpre-B cell allelic exclusionInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0033151Biological ProcessV(D)J recombinationInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0097519Cellular ComponentDNA recombinase complexInterproscan
GO:1905347Cellular Componentendodeoxyribonuclease complexInterproscan
GO:1990238Molecular Functiondouble-stranded DNA endonuclease activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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