| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g10653 | VINCULIN | HiC_scaffold_4 | 10892411 | 10961683 | - |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01044 | Vinculin | Vinculin family | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006077 | Family | Vinculin/alpha-catenin | Interproscan |
| IPR017997 | Family | Vinculin | Interproscan |
| IPR036723 | Homologous_superfamily | Alpha-catenin/vinculin-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46180 | VINCULIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003779 | Molecular Function | actin binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005856 | Cellular Component | cytoskeleton | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0005912 | Cellular Component | adherens junction | Interproscan |
| GO:0005925 | Cellular Component | focal adhesion | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0008013 | Molecular Function | beta-catenin binding | Interproscan |
| GO:0044291 | Cellular Component | cell-cell contact zone | Interproscan |
| GO:0045294 | Molecular Function | alpha-catenin binding | Interproscan |
| GO:0051015 | Molecular Function | actin filament binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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