| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SQW42HX01_g10293 | ENDONUCLEASE III-LIKE PROTEIN 1 | HiC_scaffold_4 | 2246599 | 2249998 | - |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00633 | HHH | Helix-hairpin-helix motif | Motif | Interproscan |
| PF00730 | HhH-GPD | HhH-GPD superfamily base excision DNA repair protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000445 | Conserved_site | Helix-hairpin-helix motif | Interproscan |
| IPR003265 | Domain | HhH-GPD domain | Interproscan |
| IPR003651 | Conserved_site | Endonuclease III-like, iron-sulphur cluster loop motif | Interproscan |
| IPR004035 | Binding_site | Endonuclease III, iron-sulphur binding site | Interproscan |
| IPR004036 | Conserved_site | Endonuclease III-like, conserved site-2 | Interproscan |
| IPR011257 | Homologous_superfamily | DNA glycosylase | Interproscan |
| IPR023170 | Homologous_superfamily | Helix-hairpin-helix, base-excision DNA repair, C-terminal | Interproscan |
| IPR030841 | Family | Endonuclease III-like protein 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR43286 | ENDONUCLEASE III-LIKE PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000703 | Molecular Function | oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0003906 | Molecular Function | DNA-(apurinic or apyrimidinic site) endonuclease activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006284 | Biological Process | base-excision repair | Interproscan |
| GO:0006285 | Biological Process | base-excision repair, AP site formation | Interproscan |
| GO:0006296 | Biological Process | obsolete nucleotide-excision repair, DNA incision, 5'-to lesion | Interproscan |
| GO:0019104 | Molecular Function | DNA N-glycosylase activity | Interproscan |
| GO:0051539 | Molecular Function | 4 iron, 4 sulfur cluster binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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