Detailed information of SKAU_T00427390 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00427390MHC CLASS II-RELATEDJAINUF010000030.1190194229890-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00993MHC_II_alphaClass II histocompatibility antigen, alpha domainDomainInterproscan
PF07654C1-setImmunoglobulin C1-set domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001003DomainMHC class II, alpha chain, N-terminalInterproscan
IPR003006Conserved_siteImmunoglobulin/major histocompatibility complex, conserved siteInterproscan
IPR003597DomainImmunoglobulin C1-setInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR011162Homologous_superfamilyMHC classes I/II-like antigen recognition proteinInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014745Homologous_superfamilyMHC class II, alpha/beta chain, N-terminalInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050160FamilyMajor Histocompatibility Complex/ImmunoglobulinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19944MHC CLASS II-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0006955Biological Processimmune responseInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0019882Biological Processantigen processing and presentationInterproscan
GO:0042613Cellular ComponentMHC class II protein complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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