Detailed information of SKAU_T00419060 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00419060ORF PROTEIN-RELATEDCM056399.169497466966017-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00822PMP22_ClaudinPMP-22/EMP/MP20/Claudin familyFamilyInterproscan
PF06862UTP25Utp25, U3 small nucleolar RNA-associated SSU processome protein 25FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003935FamilyLens fibre membrane intrinsic proteinInterproscan
IPR004031FamilyPMP-22/EMP/MP20/ClaudinInterproscan
IPR010678FamilyU3 small nucleolar RNA-associated protein 25Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12933ORF PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005212Molecular Functionstructural constituent of eye lensInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0019843Molecular FunctionrRNA bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034511Molecular FunctionU3 snoRNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP