| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SKAU_T00404880 | PROTEIN LIN-28 | CM056396.1 | 21662301 | 21687512 | - |
| CDS | |||||
| SKAU_T00404880 | |||||
| Transcript |
| SKAU_T00404880 |
| Protein |
| SKAU_T00404880 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | CSD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00069 | Pkinase | Protein kinase domain | Domain | Interproscan |
| PF00098 | zf-CCHC | Zinc knuckle | Domain | Interproscan |
| PF00313 | CSD | 'Cold-shock' DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000719 | Domain | Protein kinase domain | Interproscan |
| IPR001878 | Domain | Zinc finger, CCHC-type | Interproscan |
| IPR002059 | Domain | Cold-shock protein, DNA-binding | Interproscan |
| IPR008271 | Active_site | Serine/threonine-protein kinase, active site | Interproscan |
| IPR011009 | Homologous_superfamily | Protein kinase-like domain superfamily | Interproscan |
| IPR011129 | Domain | Cold shock domain | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR017441 | Binding_site | Protein kinase, ATP binding site | Interproscan |
| IPR036875 | Homologous_superfamily | Zinc finger, CCHC-type superfamily | Interproscan |
| IPR051373 | Family | Lin-28 homolog RNA-binding protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46109 | PROTEIN LIN-28 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0004672 | Molecular Function | protein kinase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006468 | Biological Process | protein phosphorylation | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0031054 | Biological Process | pre-miRNA processing | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
