Gene detail

Detailed information of SKAU_T00392250 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00392250	BOMB/KIRA PROTEINS	CM056395.1	17153340	17207348	+

Gene Structure

More details in Jbrowse Sequence

CDS

SKAU_T00392250

ATGCCTAGAAAGGGGAACGGGCAGCTGCCGTTACCGGACGGCTGGGAAGAAGCGAGGGATTACGATGGTAAAGTGTTTTATATCGACCATAATACTAAGCAAACCAGCTGGATCGACCCAAGGGACAGGTTGACGAAGCCCCTGTCCTTTGCGGACTGTGTGGGAGATGAGTTGCCGTGGGGATGGGAGGCCTCTTACGACCCGCAAATCGGGATCTACTACATCGACCACATCAACAagatCACCCAGCTGGAGGACCCTCGGAAGGAGTGGCGTAAGGAGCAGGAGCGCATGCTGAAGGACTACCTGACGGTGGCGCAGGATGCCCTGAGCACGCAGAAGGAGCTGTACCAGGTGAAGGAGCAGAGGCTGGCTCTCGCGCTGGACGAGTACGTGCGCCTCAACGACGCGTACAAGGAGAAGTCCAGCTCCCGCACCAGCCTGTTCTCCGGGTCATCTTCCAGCACCAAGTACGACCCCGACATCTTAAAGGCCGAGATATCAACCACTAAAGTCAGGgtaaataaactgaagagAGAACTCTCACAAATGAAGCAAGAACTTCTGTACAAAGAACAAGGCTTTGAAACCTTGCAACAAATCGACCAAAAAATGTCTGGTGGCCAGAGTGGCTACAAGCTGAAAGAGGCAAAGGCCATTGTGAGTGAGCTGAAGTCCATTCGCAAGGCAATCAGCTCCGGGGAGAAGGAGAAACAGGATCTAATGCAGTGTTTGGCCAAGCTGAAGGAGCGGTTCCATTCGGACCAGAACATGGGGCGCTCAGAACCCGACCTCCGGCACCCTGCTGGGTCTCACCTCCTGCTGTCCCGACACACTCTGGACGCCGGATCCCAAACCGACGTTTCAGGAGAGGCGGGTTTGGGGAGCAGGTCCACCCTGGCAGAGAAGGTCCGTCTGAGCCTGCAGTACGAGGAGGCCAAGAGGAGCATGGCCAACGTGAAGATCGAGCTGGCGAAGCTGGACAGCGAGACGTGGCCGGGAGCGCTGGACGTGGAGCGTGAACAGCTGATGCTCATCAACGAGAAGGAGGAGCTACTGAAGGAGCTGCAGTTTGTGACGCCGCGGCGGCGCACCCAGGGGGAGCTGGAGCGCCTGGAGGCCGAGAGGCGCCGTCTGGAGGAGGACCTGCTGTCCGTCAAGAGCACCCCCAGCCAGGCATTGGCCCAGAGGTTAAAGGCCCAGGAGAGGAGGCGCACCCTGGTGCAGAGGCTGGAGGAGTCCACCAGGCTGGCCACACTCCTGCACACTCAGCTCAAAAGCCTGTCAGCCAGCACGCTGTCGGTGTCGTCGGGCAGCAGCCTGGGCTCCCTGGCCTCCAGCCGAGGCTCTCTCAACGCCTCCAGCCGCGGCTCGCTAAACTCGCTGAGCTCCAGCGACCTGTACTACAGCCCGCCGGAGCAGCCGCTAGACCTGGACTACCAGTACAAGCTGGACCTCCTCCTGCAGGAGAAGCCCTCCTACTCCCCGTCGGGCCCCATCACCACCATCCACGAGAACGAGGTGGCCCGGAGCCCCGCCGACGGTCCCCGCGCCGGCCGGccacgccccgccccgcccgtcCGAGCCGCCCAAGTCGGTGGCGTCGCTGTCGTCCCGCTCGTCGCTGTCGTCGCTCTCGCCGCCGGGCTCCCCGCTGGTGCTGGAGGGTGCCTTCCCGCCGTCTGTCCAGGACGCGCCCGCCCACTTCGGCGACGGAGGCGAGGCGGCCGCCGGCGACTTCGCCGGCCTCGGCTTCTACGAAAACCAAATCCCGCTGGACCCCGAGCCGGGGGAGAAGGACCTGAGCGACGTCGTCCGGCGGGTTCCCCTGGCGACGCTCCGCGAAGGAATGTCAGACGCGGACCTGCAGAGACGGGCGGCGGGCTGCCTGCTGGAGGAGAAGCCGGCGTGCGTGTCGGCCGCCGTGTCCGACGAGTCGGTGGCGGGAGACAGCGGGGTTTACGAGGCGTCCGTCAAACGGTGCGTAGAGGTGGAGGACCAGGTGTATGTGGAGGACGAGCCCAGCGTACCAGAGGCTACTCAGGTCCAGATGGGGTTCAAGTACGACGCGGCCAACGGAAGTTTTGTCGTTGTCATCATGCAGCTACAGAACCAGGCGGCTCTCCTGGTTCCGCCCGGTACCAAAGTGTATGTCCGAGTGGCTCTCCTGCCGTCCTCCAGCGACGTCAGCAGCCTGTTCCCGCACCAGGGTCCAGGCCCTGCCGGGGGGCTCGGCGCTGA

Transcript

SKAU_T00392250

TGTCTATCCGGACTGTTAGGAACTAAGATGGAGGACTGGGAAGAGCCAAATATGGACCTGTATTGAATTTTGTAGATCCAAGGATTTCGTTTCTTCTTTTCCGTACTTATGGAGGAACTTCTAGGAGGTGATAATGCCTAGAAAGGGGAACGGGCAGCTGCCGTTACCGGACGGCTGGGAAGAAGCGAGGGATTACGATGGTAAAGTGTTTTATATCGACCATAATACTAAGCAAACCAGCTGGATCGACCCAAGGGACAGGTTGACGAAGCCCCTGTCCTTTGCGGACTGTGTGGGAGATGAGTTGCCGTGGGGATGGGAGGCCTCTTACGACCCGCAAATCGGGATCTACTACATCGACCACATCAACAagatCACCCAGCTGGAGGACCCTCGGAAGGAGTGGCGTAAGGAGCAGGAGCGCATGCTGAAGGACTACCTGACGGTGGCGCAGGATGCCCTGAGCACGCAGAAGGAGCTGTACCAGGTGAAGGAGCAGAGGCTGGCTCTCGCGCTGGACGAGTACGTGCGCCTCAACGACGCGTACAAGGAGAAGTCCAGCTCCCGCACCAGCCTGTTCTCCGGGTCATCTTCCAGCACCAAGTACGACCCCGACATCTTAAAGGCCGAGATATCAACCACTAAAGTCAGGgtaaataaactgaagagAGAACTCTCACAAATGAAGCAAGAACTTCTGTACAAAGAACAAGGCTTTGAAACCTTGCAACAAATCGACCAAAAAATGTCTGGTGGCCAGAGTGGCTACAAGCTGAAAGAGGCAAAGGCCATTGTGAGTGAGCTGAAGTCCATTCGCAAGGCAATCAGCTCCGGGGAGAAGGAGAAACAGGATCTAATGCAGTGTTTGGCCAAGCTGAAGGAGCGGTTCCATTCGGACCAGAACATGGGGCGCTCAGAACCCGACCTCCGGCACCCTGCTGGGTCTCACCTCCTGCTGTCCCGACACACTCTGGACGCCGGATCCCAAACCGACGTTTCAGGAGAGGCGGGTTTGGGGAGCAGGTCCACCCTGGCAGAGAAGGTCCGTCTGAGCCTGCAGTACGAGGAGGCCAAGAGGAGCATGGCCAACGTGAAGATCGAGCTGGCGAAGCTGGACAGCGAGACGTGGCCGGGAGCGCTGGACGTGGAGCGTGAACAGCTGATGCTCATCAACGAGAAGGAGGAGCTACTGAAGGAGCTGCAGTTTGTGACGCCGCGGCGGCGCACCCAGGGGGAGCTGGAGCGCCTGGAGGCCGAGAGGCGCCGTCTGGAGGAGGACCTGCTGTCCGTCAAGAGCACCCCCAGCCAGGCATTGGCCCAGAGGTTAAAGGCCCAGGAGAGGAGGCGCACCCTGGTGCAGAGGCTGGAGGAGTCCACCAGGCTGGCCACACTCCTGCACACTCAGCTCAAAAGCCTGTCAGCCAGCACGCTGTCGGTGTCGTCGGGCAGCAGCCTGGGCTCCCTGGCCTCCAGCCGAGGCTCTCTCAACGCCTCCAGCCGCGGCTCGCTAAACTCGCTGAGCTCCAGCGACCTGTACTACAGCCCGCCGGAGCAGCCGCTAGACCTGGACTACCAGTACAAGCTGGACCTCCTCCTGCAGGAGAAGCCCTCCTACTCCCCGTCGGGCCCCATCACCACCATCCACGAGAACGAGGTGGCCCGGAGCCCCGCCGACGGTCCCCGCGCCGGCCGGccacgccccgccccgcccgtcCGAGCCGCCCAAGTCGGTGGCGTCGCTGTCGTCCCGCTCGTCGCTGTCGTCGCTCTCGCCGCCGGGCTCCCCGCTGGTGCTGGAGGGTGCCTTCCCGCCGTCTGTCCAGGACGCGCCCGCCCACTTCGGCGACGGAGGCGAGGCGGCCGCCGGCGACTTCGCCGGCCTCGGCTTCTACGAAAACCAAATCCCGCTGGACCCCGAGCCGGGGGAGAAGGACCTGAGCGACGTCGTCCGGCGGGTTCCCCTGGCGACGCTCCGCGAAGGAATGTCAGACGCGGACCTGCAGAGACGGGCGGCGGGCTGCCTGCTGGAGGAGAAGCCGGCGTGCGTGTCGGCCGCCGTGTCCGACGAGTCGGTGGCGGGAGACAGCGGGGTTTACGAGGCGTCCGTCAAACGGTGCGTAGAGGTGGAGGACCAGGTGTATGTGGAGGACGAGCCCAGCGTACCAGAGGCTACTCAGGTCCAGATGGGGTTCAAGTACGACGCGGCCAACGGAAGTTTTGTCGTTGTCATCATGCAGCTACAGAACCAGGCGGCTCTCCTGGTTCCGCCCGGTACCAAAGTGTATGTCCGAGTGGCTCTCCTGCCGTCCTCCAGCGACGTCAGCAGCCTGTTCCCGCACCAGGGTCCAGGCCCTGCCGGGGGGCTCGGCGCTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00397	WW	WW domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202	Domain	WW domain	Interproscan
IPR036020	Homologous_superfamily	WW domain superfamily	Interproscan
IPR051105	Family	WWC/KIBRA Hippo Pathway Regulators	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14791	BOMB/KIRA PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0016477	Biological Process	cell migration	Interproscan
GO:0019900	Molecular Function	kinase binding	Interproscan
GO:0035330	Biological Process	regulation of hippo signaling	Interproscan
GO:0046621	Biological Process	negative regulation of organ growth	Interproscan
GO:0060090	Molecular Function	molecular adaptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-