| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| SKAU_T00389170 | MHC CLASS II TRANSACTIVATOR | CM056395.1 | 7829515 | 7864714 | - |
| CDS | |||||
| SKAU_T00389170 | |||||
| Transcript |
| SKAU_T00389170 |
| Protein |
| SKAU_T00389170 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05729 | NACHT | NACHT domain | Domain | Interproscan |
| PF13516 | LRR_6 | Leucine Rich repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR006553 | Repeat | Leucine-rich repeat, cysteine-containing subtype | Interproscan |
| IPR007111 | Domain | NACHT nucleoside triphosphatase | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47189 | MHC CLASS II TRANSACTIVATOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0045345 | Biological Process | positive regulation of MHC class I biosynthetic process | Interproscan |
| GO:0045348 | Biological Process | positive regulation of MHC class II biosynthetic process | Interproscan |
| GO:0045944 | Biological Process | positive regulation of transcription by RNA polymerase II | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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