Gene detail

Detailed information of SKAU_T00385680 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00385680	ABHYDROLASE DOMAIN-CONTAINING PROTEIN	CM056394.1	29096311	29140812	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00385680

CGGTCTGTACCATGGAATGTCCTTACCGCAGGTGCTGCTGAGTTCAGTTAATTCTGAGCGTGTGACGCTACTCTTGCAGCCTCTCGCAGGTTGATAACGGAGCACTATCCCCCGCTTCCCTATTTTCTGTAGTCTTTCACTGGCGCTCTCACAACGCCGAAGACGCCCTTAGCTGCCCTCCAACGCGTGGTAACCGGGAATTGGAAATGATCGCACTGGCGTTAAATCTCAACGTTTTGACAAGGGACCTGTCATTATACCTGGAAAATCAAGTCAAAGTCGGGCTTTTCGGGTCTGGAGTGGGACTGTCCTTAGTACTCGGCTTCAGCGCCGCGTACGCTTGTTTCTACTTGATCTCGATAGCCAAGAAACCACAACTGATTTCAGGGGGGAAGAAATTCTACCACTTTCTGAGGGAGCAATGCCCTGTGGTCTCAGAGACATACTATCCCACCTTCTGGTGCTGGGAGAGCCGGGTTCAAACACTGCTCAGGCCCTTTGTCACAGCAAAGCCAGTAGTCTGCTACAGAAATGAGCTCATTAAAGCGGCAGATGGCGGCCAGATTTCCTTGGATTGGTTTGATAATGATGACAGTACCACCCATCCGGACCCGGCCATCCGGCCCACTGTCTTGCTGCTGCCCGGGCTCACCGGAACCAGTCGGGAGTCGTACATCCTGCACATGGTCCAACAGAGCCGGGAACTTGGCTACAGATGTGTGGTGTTCAACAACAGAGGGGTGTCTGGTGAAAGACTCTTGACCCCGCGGACGTACTGTGCGGCCAACACGGAGGACCTGGAGGCTGTCATCGCGCACGTCCAGAGCACCAACGCGGCCGCCCCGCTGATGGCTGCAGGCGTCTCCATGGGAGGGATGATGCTGGCCAACTACCTGGGCCAGAAGGGGCGGGACACGTGCCTGCGTGGGGTCGTGGTGTTCTCAGCCGGCTGGGACGTGTTTGAGTGCACCGCCTCATTGGAGAAGCCTTTGGACCGATTCCTCTTCAACTCCTACCTCACAAGCTGCCTGCAGGCCTCTGTCGATAGGCACCGGCCCGTACTTGAGAAACTCTTTGACATTGACCACATAATGAAGGCGAAGACTGTGAGGCAGTTTGACGAGAGGTTCACCTCCATCATGTTCGGCTACCGGACCAACGAGGACTATTACCGGGACGCCAGTCCCATCCACAGGCTGAAGTCCGTGCAGGTGCCCATGCTGTGTCTTAATGCCGCAGACGATGTCTTCTCCCCCAACCACGCGTTCCCCGTGGAGGTCGTGAAGCAGAACCCCAATGTGGCGCTGCTCATCACCGACCACGGCGGGCACATTGGCTTCCTGGAGGGTGTCTGGCCCTGGCGAAACACCTACATGGACCGCGTCTTCAGGCAGTTCACCAAGGCCGTCATCGAGCAAGGGACCCGGCTGGGTGACCTTTAAcgacaaccccccccacccccgtcccaGGCTAGCGCCGTCCGCTGtccaaacccccccccaaccTACCATGTGCAAAAAATACACGGCAGTGTACATTTCCAAAACCAGTAACGCACAATCAAGGTACACCCAGTGTTAAGGGCAACTTGCAGCAGCGTTCGTGTTCAACAGCATTAACTCACCCGCTTAACATTTTATCTTTAGTCCTGCTATGATTCCCAAGAGGATCCTGCAGATTATTTAATTTTACTACTGTACCACTCCTGACCTTTATGTTACCTCATTTGTTTTAAACGGaaatccaccaaaaaaaaaatcttaatttcAAATGTTgtcctgcatgtttaaaacagttGATGCTCATTGAATAATGTCTTGAACTGAACCTGACAACCTGATAATCTGGAAAGGAAGCGCTGAGAGTCATGTGACCAGAAGCTGAAGCCTGCACAGCACCAGTGCAGATACACTGACCCTCATGTTATCTGAACAGACGAAGAACAAGAATCATAACATCCAGATCATGCAATGATCATTCATTTGTTACTTTGCCTTGAACTGCATATCAAATTAGGTTTTTATTTggtggtggggaggtgggggtgatGTACTTTTATCTCTCGGTTTTAATCGGTCCTCAGGGATTTTATTTAATGGCATATAAGCACTTCTTCATAGGTAGGTTATCCCATACCAGATCACCATCAGTATTCTGTGTTCTCTTGAAATGCAATATACTCAATGGAACTTAATTTTTCCATCTTCTTGTTGGTTGCACACAAAACCGTCCTAACCagggttattatagttttgaaatgttaattagtttttatttttatttagttttccaCTTTGATTTCAATTTCTGTTTCATTCTGGTTCATTTTAAGAATGGGTTTGATAGTTATAGTTTAGTTTCCGTTTTTTGGAAATAGTAGTTTCACTTTAgtttcacttttttttgggtgggtACCCCACTTGTTAGGGTCAATGTTTTAGAGGTTTAGAACTGGTATTGTGTACATGTTTAAGCTAGGTattgtgtaaaacaaacaataaatcaAATAATTTATATCATAtaatatttgaatggatctctatgggaattggggggtgcgactagattaagctgtaaattacacaggaatagtatggaacccatggtcggctaaatggctgtaaatcatcaagggtctgaggtgtcaaatgagcctcaaaccatcactctgctgccagatatgcagtagatatggatggatcaattgaagggttgtttctcctcactaattttcctattaaactatGGAAAAAGGACATCATTTTCTACAACTTAATCTTATGACATTCATGCCTATATAAGGATATTCTATTTAACATATTCATGCAGCAATACAATTTTAATATAAAATGCAAATTGTACAATTTATGTACACGTATATGGATTATAAGTACATAaactgtatttaataaattattaaatcCAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000073	Domain	Alpha/beta hydrolase fold-1	Interproscan
IPR000952	Conserved_site	AB hydrolase 4, conserved site	Interproscan
IPR012020	Family	AB hydrolase 4 family	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR050960	Family	AB hydrolase superfamily, subfamily 4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10794	ABHYDROLASE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004623	Molecular Function	phospholipase A2 activity	Interproscan
GO:0008126	Molecular Function	acetylesterase activity	Interproscan
GO:0008970	Molecular Function	phospholipase A1 activity	Interproscan
GO:0034338	Molecular Function	short-chain carboxylesterase activity	Interproscan
GO:0044255	Biological Process	obsolete cellular lipid metabolic process	Interproscan
GO:0046470	Biological Process	phosphatidylcholine metabolic process	Interproscan
GO:0047372	Molecular Function	monoacylglycerol lipase activity	Interproscan
GO:0051792	Biological Process	medium-chain fatty acid biosynthetic process	Interproscan
GO:0051793	Biological Process	medium-chain fatty acid catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-