Detailed information of SKAU_T00383120 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00383120WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBERCM056394.12057190220609606-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00004AAAATPase family associated with various cellular activities (AAA)DomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF12002MgsA_CMgsA AAA+ ATPase C terminalDomainInterproscan
PF16193AAA_assoc_2AAA C-terminal domainFamilyInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR006642DomainRad18, zinc finger UBZ4-typeInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR008921Homologous_superfamilyDNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR021886DomainMgsA AAA+ ATPase C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032423DomainAAA C-terminal domainInterproscan
IPR051314FamilyAAA ATPase RarA/MGS1/WRNIP1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR13779WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000731Biological ProcessDNA synthesis involved in DNA repairInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008047Molecular Functionenzyme activator activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0017116Molecular Functionsingle-stranded DNA helicase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP