Gene detail

Detailed information of SKAU_T00370640 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00370640	TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE	CM056393.1	16467961	16525298	-

Gene Structure

More details in Jbrowse Sequence

CDS

SKAU_T00370640

ATGGACGGTTGCTCcacagactgcaatgggaatggcgAGTGCGTGGCAGGCCACTGTCACTGCTTCACTGGATTCCTAGGTCCTGACTGTGCAAAAGATTCCTGCCCGGTCCTGTGCAGTGGGAACGGGGAGTATGAGAAGGGCCACTGCGTGTGCCACCCGGGCTGGAAGGGCCCGGAGTGTGACCTCCAGGAGGACCAGTGCATGGACCCCACCTGCTCTAACCACGGAACCTGCATCCAGGGCATCTGCATGTGCAGCCCCGCCTACAAGGGCAACAACTGCGAGCAAGTGGACTGCCTGGACCCTCAGTGTGCGGGCCATGGCGTGTGCGTGAAGGGGGAGTGTCTGTGCTcgccggggtggggtggggacggCTGTGACACCCCCTTGCCAGCCTGTCAGGAACAGTGCTCTGGACACGGCACATACCTGCCCGATACCGGCACCTGTACCTGCGAACCCAGCTGGACCGGTTCTGACTGCTACATAGAGGTGTGTCCGGTGCCTTGCGGCAACCATGGCGTGTGCTCAGAAGGGCGGTGCCAATGCGAGGACGGCTGGGAGGGGCTAGGGTGTGACCAGCGGGCGTGTCACCCTCGCTGTGAGGAACATGGTCAGTGTCGGGATGGAAAGTGCGAGTGCCACCCGGGCTGGGAAGGAGACCACTGCACTATCGCACACTACTTGGATGCTGTTGTCAAAGACGGCTGCCCGGGTCTCTGTAACGGCAATGGTAGATGCACACTGGAGCAGAGCGGGTGGCACTGTGTGTGTCAGGCAGGCTGGAGCGGCGTGGGCTGCAACGTCGTCATGGAGACCGAGTGCGACGACAACACCGATAACGACGGAGATGGATTGACAGACTGCGTGGACCCAGACTGCTGCCAGCAGCCCAGCTGTTCTAGCGGCCCTCTCTGCCAGGGCTCCCCTGACCCGCTGGAGTTGGTGCAGCAGAACCAGATGCCTTTCTTCCAGCTGCTCCCGCGCCTCTTCTTTGACCGCGTCCGTTTCCTGGTGGGCAAGGCCAGCACCCACGTCCTGCCAGGGGACTTGCCCTTCGACAGCAGCCGGGCGTCTGTTGTGCGGGGCCAGGTTGCAGCAATAGATGGGACCCCACTGGTGGGAGTCAATATCAGTTTCCTGCAGCATCCCGAGTACGGCTTCACGGTCAGCCGGCAGGACGGCAGTTTTGACCTCGTCGCTTCCGGGGGGATCTCTGTGGCCCTGGTGTTCCAGCGAGCCCCCTTCATTACTGAGAGACGCACTGTCTGGTTGCCGTGGAACCAGTTTGTGGTGCTGAACAAGGTCACCATGGATAGAGTGGAGACCCCACCCGCCATCTGTGACATCAAGAACTTCATCAGTCCGTATCCTGTGGTCCTGCCTGCCCCCCTCACCCGGTTTGCTGGTGCCTGTGTGGCGCGGGGCCCTGCCATTCCGGAGCTGCAGGCTGTCCAAGAGGAGATTCCCATCCCGGGCAGCTTTGTGAAGCTGAGCTACCTCAGCACCCGAACGCCGGGCTACAAGTCCCTGCTGAGGATCGTCCTGACCCCCTCCGTCATCCCCGCCGGCCTGGCCAAGGTGCACGTGGCGGCCGAAGTCGAGGGCCGCCTCTTCCAGAAGTGGTTCCCCGCCGCCCCCGGGCTGGTCTACATCTTGGCTTGGAACAAGACCGACATCTACGGCCAGAAGGTCACGGGGCTAACGGAAGCCATCGTGTCAGTGGGCTATGAGTATGAGTCGTGCCCTGACTTCATTGTGTGGGAGAAGAGGACCGCGCTGCTCCAGGGGTTCGAGATGACCGGGTCAAACCTGGGTGGCTGGTCCCTGGACAAGCACCACATTCTCAACCTGCAAAGCGGGATTCTCCACAAAGGCAACGGCGAGAACGTGTTCATATCCCAGCAGCCCCCTGTCATCACCACGGTGATGGGGAACGGTTACTACCGCACCATCCCCTGTCCCAGCTGCAACGGCCCTGCCCTGGACAGCAAGCTCTTCGCCCCCGTGGCCGTGGCCTGCGGCTCAGACGGCAGCGTCTACGTCGGGGATTTTAACTTCGTGAGGCGAATCCTCCCAAACGGCTACACCATCAGCATCCTGGAACTCAGGAACCGTGACATAAGACACAGCACCAGCCCGGCCCATAAGTACTACCTGGCCATGGACCCCGTGACCGAAGCCCTCTACCTCTCGGACACCAGCAGCAGGAAGGTGTACCGGCTGAGGACTCTCACCGAGCCCAAAGACCTGGCCAAAAACGTGGAGGTGGTGGCCGGGACCGGGGAGCAGTGCCTGCCCTTCGACCAGGATCACTGCGGAGACGGGGGAAAGGCATCGGAGGCCCTGCTCAACAACCCCAGAGGTAAGACCCCAGTGATGAGCAGGACGCGCTGCTCTATTCCTCGCCAGAAAGCCACTCTAAACGGGAAGACTCTAAactgcccgcTGTGGTTTGGTGAGAGGAAGAGAGCCATGTTCATCGGCCACAAATCAGCCCCAACCGCAACCCCGAATGACTGA

Transcript

SKAU_T00370640

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07974	EGF_2	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR008969	Homologous_superfamily	Carboxypeptidase-like, regulatory domain superfamily	Interproscan
IPR013111	Domain	EGF-like domain, extracellular	Interproscan
IPR051216	Family	Teneurin domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11219	TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007157	Biological Process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan
GO:0042803	Molecular Function	protein homodimerization activity	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan
GO:0048666	Biological Process	neuron development	Interproscan
GO:0050839	Molecular Function	cell adhesion molecule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-