Gene detail

Detailed information of SKAU_T00368550 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00368550	DAP3-BINDING CELL DEATH ENHANCER 1	CM056393.1	11519705	11535573	+

Gene Structure

More details in Jbrowse Sequence

CDS

SKAU_T00368550

ATGTGGAGAATACAAGGGCTAGTGTGCAGAGTTCTGAGCCGCTGTCACGCCAACGCGCCTCTGCGCGTCTCCCAGACCCACCACCACGTTGAGGATGATGTTCGCGGCACCTCCACGGTTCTGTCCACCGGCCTGCTCCCGTCTGACAGCAGCTCGCAGACTGGCGGAaatggagagaggcagagaaggAAGAGGACTTCGCAGTTCTGCTACTCTGGCCTGCCCCGTTACAGCGCCCTGGATGCCGTGGGATGGGGCGTGGCCGCCATGCTCCTCATGCAGATCTGCAGGAGGATCCACTCCCAGTTCTCCTCTGTGAGCGAGTCCAATGCCGCCCCAGGGCTGTACAGGGAGGCGGGACTGCTGCAGAGGTGTGGCTACAGGGTTCTGCTGGAGATCTtgtccCAGCAGGACGTCCTGCCCAGGGGGATTCCTGTGAATTACCTTGGGAGCGTGCAGGCCATCcagggcagcagcagtggtaGCACTGTTGGCCACACCCACTCATCAGAAGACCCCGCCCCCTCTCATATAGAGAACTTGTTTTTAAGCAATGACTCCGTCCAATCAGGGGACCCCCTGTCCTCCTCAGACTGTGACCCCAAAGACGCCAGCCCTTCTCAAACCCCCAAAGATAACACTAAGGATCCTCTCTGCCCAGAGGATGAGGAGCTGAATGGTGCAGCAAACAACCTGAAGCAGATTGCAGATTCCAGTGTGCCTGTCATTCTGAATATCATCGGCATAGAGAATGCTAAGAGTGGAGACTACCAGGCTGCTTTCTCCTGTTTCCTGGCTTCTGCCCAGCATGGTTACAGCAAAGCGCAGTTCAACGTGGGAGTCTGCTACGAGAAGGGAAGAGGAGTCCAGAGAGACAAGGACCAGGCTGCTGAGTTCTACCGACAGGCGGCCGCAGGTGGACACGGTCAGGCCATGTACCGTTATGCCAAGCACCTCCTGTACTCTAGGGGTCAGCAGAGTGCGGAGGATACACACACAGCCATTGAGCTGCTCGAGGGAGCTGCTGCCTCTGGAGTGAGAGAGGCCCAGGCTTACCTGGGAGTGCTGTTCTCCCAGGAGTCACTGAGAGATGAACAGAAAGCAGTCGGCTATCTGAGAATGGCCGCCGAGAACGGGGACTCGCTCAGCCAGCTGTACCTGGGTCAGTGTTACGAGTGTGGCTTTGGGGTGCAGCAGTGTTTCAGGACTGCTGTAGAGTTGTATCAGCAGGCTGCCAAAGCCGGGAACCAGCAGGCCCAGAACATCCTCTCGGCCCTCTACTTTACAGGCAGAGGAGTCCCTGAGGAAGCAGCCCTGCGCTCGATCCGCTCCGCACCGTGTTTCTCTACGCGCGATGCCCTCCAGCTCcgcctccgtccctccctctccAACATGGAGTCCAACTCCCCTTTCCAGGCCCTCCCGCACTCCTGGAGCACGGGCAGCTTCCTGGCACAGTCCCTCCCCAGCAGCAGCCTACCTTCTGAGCGCGAGAGAACAGGGGGGAGCCCGCAGCTGCCCAATTCTGCCCCTTTTAATACGAAGCGTACGCAGAAATGCTTCCAGCTCTATGCGGATCTACACTTCgtgATTCCCCGGTGCCATCTCTTCATCATGTGGTTCCTCGTCGTCTCACTGCCATTGCTCCCAGTGATTATTGTCACGGTGACACGTTACTGGGGCGACCTGGGAGCGTTCTACCAGCGCCTCCTACGCGCGACGCCCAAGCTGCCGTGGCGAGCAGCGGTTTGCGTGCGCAGCACGCACGACTTTGTGTTCAAGAACTGCACTCACGGCCGGTCCGAGAGCGTGCTGGAGACCTTCGACCTGTACGGCCAGACGCACCCCTCCCTCAGTCTGGGCCCACAGAGAGGTGAGTTTCTGGACGAGGTGGTGCGACGAGTGGCCCCGACGTGGACGTTGGAGTTGGGTACACACTGCGGGTACGCCTCGGTCCGAATCCTGCgcctgctgccccctgctggccagcTGCTGACAGTGGAGCGCGATGCCACCACTGCTGATGCTGGAGAGGAGGTCATCCTGGTGGCTGGCTTCAAACACTCACAGTTCCAGCTGCTGGCGTGCCCATCGAAGGATGCCATCCTTCTGCTGCGCACCCAGGTAGGGGAGGGGCTTGTACAGCTGGTGCTGATGGACCATGACGTGGGTCAGTACCTACCGGACCTGCTGGCCCTGGAGAGGGAGGGCCTGATTTCCCCAGACTGCGTGCTGCTTTTCAACCTCACCAACCTCCCCTCAGCGAGCAATCTCCTGGAGCACGTCGGCAGCAGGCCCGAGCAGTACACCGTCCGTCGTCAGGTACACGGCCTGCTGGAGCTGCAGCGCCACCCGCTGGCCCCACAGGGGCAGGATAAATCACAATCTGGCTAA

Transcript

SKAU_T00368550

GTTTAAGCAGCCGCCAGGAACTCGGTTGCTCGCTTCCTGTCTGGTGCAATGCCAAGCATATCTTGTGACCGGTGGGCCGATCTCGCTGAACGCAAGCGTGAAAGTGGCTGTCTGACGAAACCGCAATGGAGCCGGTGTTGAATGTGGTGGTGAATTTAGCGAGATAGTAAATTTAGGGAAAATGCTATTTTACTACAGTTTAACTTAACCTACTAACTGTCCAAGACCAAGCCTCGAGCAACAAACAATATGTGGAGAATACAAGGGCTAGTGTGCAGAGTTCTGAGCCGCTGTCACGCCAACGCGCCTCTGCGCGTCTCCCAGACCCACCACCACGTTGAGGATGATGTTCGCGGCACCTCCACGGTTCTGTCCACCGGCCTGCTCCCGTCTGACAGCAGCTCGCAGACTGGCGGAaatggagagaggcagagaaggAAGAGGACTTCGCAGTTCTGCTACTCTGGCCTGCCCCGTTACAGCGCCCTGGATGCCGTGGGATGGGGCGTGGCCGCCATGCTCCTCATGCAGATCTGCAGGAGGATCCACTCCCAGTTCTCCTCTGTGAGCGAGTCCAATGCCGCCCCAGGGCTGTACAGGGAGGCGGGACTGCTGCAGAGGTGTGGCTACAGGGTTCTGCTGGAGATCTtgtccCAGCAGGACGTCCTGCCCAGGGGGATTCCTGTGAATTACCTTGGGAGCGTGCAGGCCATCcagggcagcagcagtggtaGCACTGTTGGCCACACCCACTCATCAGAAGACCCCGCCCCCTCTCATATAGAGAACTTGTTTTTAAGCAATGACTCCGTCCAATCAGGGGACCCCCTGTCCTCCTCAGACTGTGACCCCAAAGACGCCAGCCCTTCTCAAACCCCCAAAGATAACACTAAGGATCCTCTCTGCCCAGAGGATGAGGAGCTGAATGGTGCAGCAAACAACCTGAAGCAGATTGCAGATTCCAGTGTGCCTGTCATTCTGAATATCATCGGCATAGAGAATGCTAAGAGTGGAGACTACCAGGCTGCTTTCTCCTGTTTCCTGGCTTCTGCCCAGCATGGTTACAGCAAAGCGCAGTTCAACGTGGGAGTCTGCTACGAGAAGGGAAGAGGAGTCCAGAGAGACAAGGACCAGGCTGCTGAGTTCTACCGACAGGCGGCCGCAGGTGGACACGGTCAGGCCATGTACCGTTATGCCAAGCACCTCCTGTACTCTAGGGGTCAGCAGAGTGCGGAGGATACACACACAGCCATTGAGCTGCTCGAGGGAGCTGCTGCCTCTGGAGTGAGAGAGGCCCAGGCTTACCTGGGAGTGCTGTTCTCCCAGGAGTCACTGAGAGATGAACAGAAAGCAGTCGGCTATCTGAGAATGGCCGCCGAGAACGGGGACTCGCTCAGCCAGCTGTACCTGGGTCAGTGTTACGAGTGTGGCTTTGGGGTGCAGCAGTGTTTCAGGACTGCTGTAGAGTTGTATCAGCAGGCTGCCAAAGCCGGGAACCAGCAGGCCCAGAACATCCTCTCGGCCCTCTACTTTACAGGCAGAGGAGTCCCTGAGGAAGCAGCCCTGCGCTCGATCCGCTCCGCACCGTGTTTCTCTACGCGCGATGCCCTCCAGCTCcgcctccgtccctccctctccAACATGGAGTCCAACTCCCCTTTCCAGGCCCTCCCGCACTCCTGGAGCACGGGCAGCTTCCTGGCACAGTCCCTCCCCAGCAGCAGCCTACCTTCTGAGCGCGAGAGAACAGGGGGGAGCCCGCAGCTGCCCAATTCTGCCCCTTTTAATACGAAGCGTACGCAGAAATGCTTCCAGCTCTATGCGGATCTACACTTCgtgATTCCCCGGTGCCATCTCTTCATCATGTGGTTCCTCGTCGTCTCACTGCCATTGCTCCCAGTGATTATTGTCACGGTGACACGTTACTGGGGCGACCTGGGAGCGTTCTACCAGCGCCTCCTACGCGCGACGCCCAAGCTGCCGTGGCGAGCAGCGGTTTGCGTGCGCAGCACGCACGACTTTGTGTTCAAGAACTGCACTCACGGCCGGTCCGAGAGCGTGCTGGAGACCTTCGACCTGTACGGCCAGACGCACCCCTCCCTCAGTCTGGGCCCACAGAGAGGTGAGTTTCTGGACGAGGTGGTGCGACGAGTGGCCCCGACGTGGACGTTGGAGTTGGGTACACACTGCGGGTACGCCTCGGTCCGAATCCTGCgcctgctgccccctgctggccagcTGCTGACAGTGGAGCGCGATGCCACCACTGCTGATGCTGGAGAGGAGGTCATCCTGGTGGCTGGCTTCAAACACTCACAGTTCCAGCTGCTGGCGTGCCCATCGAAGGATGCCATCCTTCTGCTGCGCACCCAGGTAGGGGAGGGGCTTGTACAGCTGGTGCTGATGGACCATGACGTGGGTCAGTACCTACCGGACCTGCTGGCCCTGGAGAGGGAGGGCCTGATTTCCCCAGACTGCGTGCTGCTTTTCAACCTCACCAACCTCCCCTCAGCGAGCAATCTCCTGGAGCACGTCGGCAGCAGGCCCGAGCAGTACACCGTCCGTCGTCAGGTACACGGCCTGCTGGAGCTGCAGCGCCACCCGCTGGCCCCACAGGGGCAGGATAAATCACAATCTGGCTAATGTTCAATGCAACTGCTGCTGCTGCCGTACATTCTTTACGGCTGCGTTTGCATTGTATTCTGCATTTTGAGCGTGTGAAAAACGGTTGAGATCAGATACACCTGTAGTGCTTATCAATAGGCTGACAGTGGATGGCATCAAACAAACCATGATTTTAAAATTGGCCTTCAGGCTATTTTTCTCTGATACTGAAGCCAAGACTTCAGGTAACTGCATTATTGATGGAGAACAAACATGTTCTGGCTCCTGAGAACAAGTTGTGATTTGCTCTAACATTCCAAACAATTGAGCCATGTTTTGAGTATTTATCCcattgtccaccagggggcacttCAGGCTCAAATACAACACAAATCCACAGGATGTATGCACAAATGCGATTTCCACGCAAATCTGCTTCTGAGGAATTATTTGTAAATTTTTACCCAATCTCTGTCATTATTAATAGGACAAGACGCCATTAAGAAAAatggttaaaatgtaaaaatatcccCACCAGTTCAAAAACATTTATTAATGTCCTATATAGTGTTGTTGTTATCAGTGGATGAACATAATGTATTAGCGGTAGAATTTCATCTTTATAATTTGACTGCACACTTAGCATGGTGGATGTTGATTAGAGCAATCTCAGAAGGGTGTGTAATCCAAAACATGGCGTTTGAATGGACTGAAAACTAAGAAGCCGCCATTGTGTGATAATTTTATTAAAAAC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01596	Methyltransf_3	O-methyltransferase	Domain	Interproscan
PF08238	Sel1	Sel1 repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002935	Family	Class I-like SAM-dependent O-methyltransferase	Interproscan
IPR006597	Repeat	Sel1-like repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR052748	Family	Integrated Stress Response Activator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45011	DAP3-BINDING CELL DEATH ENHANCER 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0008171	Molecular Function	O-methyltransferase activity	Interproscan
GO:0008625	Biological Process	extrinsic apoptotic signaling pathway via death domain receptors	Interproscan
GO:0043281	Biological Process	obsolete regulation of cysteine-type endopeptidase activity involved in apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-