Detailed information of SKAU_T00366150 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00366150METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEINCM056393.149790575013322+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyMYB
Transcription Factors Familyzf-GATA

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00249Myb_DNA-bindingMyb-like DNA-binding domainDomainInterproscan
PF00320GATAGATA zinc fingerDomainInterproscan
PF01426BAHBAH domainDomainInterproscan
PF01448ELM2ELM2 domainFamilyInterproscan
PF17226MTA_R1MTA R1 domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000679DomainZinc finger, GATA-typeInterproscan
IPR000949DomainELM2 domainInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017884DomainSANT domainInterproscan
IPR035170DomainMetastasis-associated protein MTA1, R1 domainInterproscan
IPR040138FamilyMesoderm induction early response protein/metastasis-associated proteinInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10865METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan
GO:0016581Cellular ComponentNuRD complexInterproscan
GO:0042826Molecular Functionhistone deacetylase bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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