Gene detail

Detailed information of SKAU_T00364110 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00364110	HEREGULIN-NEUREGULIN FAMILY MEMBER	CM056393.1	7055	87800	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00364110

tcacgcactctctctccctctgtctccctgtctctttgcctctctccctctctctctctccctccctccctctctctctctctctctctctctctcttgctctaaGTAGGTGTATCCCTGTGTGAGAGATGAGGTCTGCTCTATATAGAGGGAGAGTAGAGAGAGAAGTGCAGAGAGACTCAAAGCGCCAGCCTCAGTCTTACCGGCACtagccgacccccccccccctccccttactTCCCTCCTTTATTCGCGGGATTACAACTCACCTCCGCCAACATGTCAGAGGGCAAGAAAAGGCAGGGGAAAGGGAGGAAGAAGATgaggaagaaggagaaggagaggaagAAACAGGAGCAGGATCTGACAGAAGCTACTGCCCCAAAGATAAAACAGCTGAAGAACCAGTCTGTGGTGGAGGGGAACAAGCTCTTACTGAAATGTGAAGCTTCTGGGAAACCCACTCCTGAATACAAGTGGTACAGAGATGGCAGTGAGTTCAAAAAGAGCAAAGCGATCAAAATAAAAAGCAGCAAgaaAAACTCCAGGATCCAGATCAACAGAGTGCGACTCGAGGATTCTGGGAATTACACGTGCGTGGCCGAGAACATGCACGGGAGGGACAACTCCACGAGCACTGTCAACGTCCAGAGCAGTACGACCACGCTGTCCCCAGGCTCCGGCCACGCCCGCAGGTGTAATGACACCGAGAGAGCTTACTGTGtgaacggaggggactgctacttCATCCACGGCATCAATCAGTTGTCCTGCAAATGTCCGTCCGAGTTCTTCGGGCCCCGGTGTCTTCAGACCGAGCCGTTACGGTTATACATGCCCAAACCGTATAAAAAGGCAGAGGAGCTCTATAAGAAGAGGGTCCTGACCATCACTGGCATCTGCGTGGCTCTGCTGGTGGTGGGAATCGTGTGTGTGGTCGCCTACTGCAAGACCAAaaaacaaaggaaaaaaatgCACGGGCACCTTCGGCAAAACATGTGCCCAGAAAACCCGAACCGGAACCTGGCAAACGGACCCAATCACCCAGGACCGGGCCCAGAGGAGATCCCCATGGTCGATTACATCTCAAAGAACGTCCCAGCTACGGAACGCGTGATACGACACGGAGCGGGAACCACCTTCAGCGGCAGCCGAGCGTCTTCCAGATCCCACCAATCATCGACCGTGACCCACTCTTCCAGTCACAGGTACGTCTCAGCGCTGACGACCCCCCGCCCGCCTCTCGCCCGTGGACTTCCATTACTCACTGCCTCCACAGGTGCCTACGTTCCAGATCACGTCTCCCAACGCCAGCCACGCCCTGTCCCTCCCTCCCGCCGCTGCCGCCCAGACGTACTACCTGGAGGACGACCAGCCGCTGCTCCGCCGCTTCCAAGTGCCCCTGCAGGACATCCAGCGGCAGGAGGCCTCCcgccaacagcagcagcagcagcgccgGACGTACCTAAACGACAGCACGGGCAGCCTGCCCTCCAGCCCCTACCGGCTAGCGGACGACGAGGAGTACGAGACCACGCAGGAGTACGTCTCCTCGCTGGAGCAACCAAAGAGAAGCGCGCCCGGAGGCGGCAGCAGGCGCTGGCGGAGGTCCAGACTCAACGGGCATGTTTCGCCTCGTGGCGGGGAGGCCGCCCGGAACTACAGCTCCCAGAGCTGCCTGTCGGACAGCGAttcggaggaagaggaggagcaggggGAGAGCACGCCCTTCCTCAGTATGCAGAACATGAACGCAGAGCCCGTCGTCGCGTACAGGCTGGCGGACAGCCGGACTTACCACCCGTCGGCTCGGCACAGCTCACGCGGCAACGCGCAAACCAGACTGACGCACTCTCGGTCTAAACCCGACAATGCAcccctttaaaagaaaaaagaaaaaaaaaagaataaatatataaaaaaactaaaattaaaaaaaaaggaaaaaaaaaaaaaaaaacctcccaaCAAACAATATGCTATAGACCTGCACCTAtaagaaatatttttattttatataacagACAGATATTCTAAACaaatgaaatatttattttcattttagcaAAAGTTGTCTACTAGCTAACAGCAAAGACTTTTTTATAGGAATACTATTTATATGTAAATTTTGATTTACAGCATTAAAAAAGACGTGCCAATTTTTTCACAACTTAAAAAATAGAATAATATTGTGGTGCCTTTTGCTGTATGCTCATGCCAGAGGTCCAGTTGAGTTTTTTGTAGCCTTTCTTATACGGACTCCTCATTTTTATAGACattcttctttttctttctttcttttttttattttttttttggttgtttgggATCTCCCCCATTTGAACTGTGATATTTTCTCTCTTCATGCAATATAAGCCACTTCTGCATAAGGTGTATGTTTACATGAATATGATTCTCAGACATAACGTTTGACATTTTCATTTTCTCTGGCAGGAAATTGTCAAATGCAACGCAGTCCTATTTCCTCCCGACGGAGAAAACACATTGTTTTGAGGCTCACCAACAAACTCACGTTGTTTCTGTTTGGTTCGTTTTTCTGCTACTGTTATTGTGAGGCATTTCCATAGGTTACAGAGGAGTGCAGGGTGTGTATGTAAGTGAGCATGGCACGTTTTGGAGGTACCTGTACATATGAGGTCAGGAAGTTCGAGTCAGAGGTGATGCGTGCGTGCGCGGGTGGGCATGCCTATGTTTTTTGCGTCTTTGCGTGCGCCAAAGCCGCGTTGACCAGCCTGGGTTTCTGTGTTCccgagagcgggg

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02158	Neuregulin	Neuregulin intracellular region	Disordered	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742	Domain	EGF-like domain	Interproscan
IPR002154	Domain	Neuregulin, C-terminal	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR040180	Family	Neuregulin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11100	HEREGULIN-NEUREGULIN FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005102	Molecular Function	signaling receptor binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0007399	Biological Process	nervous system development	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0048513	Biological Process	animal organ development	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-