Gene detail

Detailed information of SKAU_T00364100 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00364100	HEREGULIN-NEUREGULIN FAMILY MEMBER	CM056392.1	35072835	35088112	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00364100

caggtGCAAAGTGGATTACTTTGGGGAGCGATGCCAAGACCTTGTGCCCAGCCGTAAAGTCGTAGACATGAAACAAGCAGAGGAGCTGTATCAGAAGCGTGTGCTTACCATAACGGGGATCTGCATTGCGCTGCTGGTGGTCGGCATCATGTGTGTTGTTGCCTACTGCAAAACAAAAAAACAGAGGAAAAAACTTCACGATCGACTGAGGCAGAGCCTGCGGACAGAGCGCAATGCCATGGCAACCATGGCCAATGGCCCACAGATGCCCCACCCTCCCCAGGAGAGCGTCCAGCTCGTCAACCAATATGTGTCGAAAAACGCCGTCCCTGCCGAACATGTAATCGAGAAGGAAACTGAAACATCGTTCTCTGCAAGCCAATACACTTCGTCAGCCCATCAATCTACAACAGTCACCCATACTTCCAGCCAGAGCCGGGGAAACGGGCGGAGCGAGAGCCTCCTCTCCAACAGCCGCTCCGTCCTGGTGATGTCATCGTCCGTGGAGAACAGCAAGCACACGACGCCCTCCAGCCGCCGGGGGCGTCTGAACGCCGCAGGGGGTGTGCGCGATGCGAACGCCTACCTGAAGAACCCCAGGGACACTCCAGACTCTTACAAGGATTCGCCCTATAGCGAGAGGTACGTTTCAGCCATGACGACCCCAAACCGCATGTCTCCAGTGGACGTGCAATCGCCAGTATCCCCTCAGTCCCCGCCCACTGAGACATCCCCGCCCCTCTCCAGCCTGGCCACGTCCGTCCCGTCGGTGGCCGTCAGCCCGCTGGGTGAGGaggagcgccccctgctgttCGTCACCCCGCCGCGACCGCGGGACAAGCAGCGCCAGGACCGCGCCCACTCCCAAAGTGGCCAGTACCAGCGCAACTCCGCCCACTACAACCACGGCCAGGACACCCACAGCGCCCCGCCCAGTCCCCTTAGGATTGTGGAGGACGACGAGTACGAGACCACCCAGGAGTACGAGACGGCCGTCCCCCAGCAGCCCGCCAAAAAACTGCCCAACGGTCGCAGGGCCAAAAGAACAAAGGTCAATGACCACAAGACGGAGTCCAACAGCGACACGAGCTCGGAGAGCGGCAGCTCGGAGAGCGAAACGGAAGATGAGCGAGTGGGGGAGGACACGCCCTTCCTCAGCATACAGAACCCATTGGCTGCCAGCCTGGAGTCGGCATCCAGCTTCAGGTCCGCAGACAGCAGTAGGACTAACCCAGGACTTCGGCTCTCCCCGCAAGAGGATTTGCAAGCCAGGTTATCCAGTGTAATAGCAAATCAAGATCCAATTGCTGTATAAAGTGGAAGATGATAATGCGTTACTTGTCAgacataagtaaaaaaataataataataaataaataaaatttaaaaaattgtacaGTCACCACTAAACCtttattttatataaattaaGTATTTGAgggaaataattttaaaaaataaaacttttattttaGCGAAGTAGTGAATAAAGTCTTTTATAAATTAAAATGTGTGCAAATGTGTTCGTGTCATGGAAGTGCCATACACTAGTATGTAGCATAGGTCACAGTATTTCAATGGAAAAGATTATCAATGGTGCCTTTATTTTCAGTAGTGTGAACAGAAGAGAAATGCATTACGATGCTGGGCCATATATTCAAGATCTTCATGCCGCCAAATATTTGGTTTCTcgcttttaaaaattttttttttttttaagttgagaCAAATTCCACCAGCAGTGTGTATGTAATGATGCCATAACCATAACTCATCAATCCTAACTAATATCCATACAAATATTCATGCAAGTATAATGCATAGATTTGTGCTTTCAAGATTCTTTTTACAGGCAAAAGTTTAGGAAAACGTTGTACGGCGAAAAATATTTGAGTAGAGGACAGAATAAACTGAAACCGCAACAGTTACATTATCAAACAGATAAATATATTGCCTTTTAAAATGCCAGGTATGTACTATGCTTATAAGCTTTTTCCCCAAAGCTTCTACACATTTCCAGAGATATGTAAACATACTCGCTAATTGGTAATATATGCAGGCATATTTTTGTATTGAATATTGGGTATTGTTAGATTTGGTGGATTTCAGTAAATCTGTTGTGATGCTTTTCAGTAACAGTTATTGGTAAACTTCCATCACTGAGCCACTGCATAAACAGTGTTCTGCTGTATTACCACATTTTCCTGTACAATGCAGCGTGTCATTTCACCCCAAACTCTACCGTAAAAAACGCATCAGTGGATGTAGGATTGAAAATTAAATCTCTGAGTTCAAGAATTAGGGACTTTGTATTTTAACTGGTGAAGAGAATGATGCCTCGAGATGATGCGACTTCTTTGAAtaaaaatttgaaataaaactTAGAATAAAATATCCAAGGTTACCATGacaaagtgatttaaaaaaaaatctgggtCACTCTATCCATGATATGCCCTGACAGTATTTTATTCTTTCAGCatagtgtgtctgtgcatgtgtgcacgtgtgtatgtgttcacGCAATTTGACTAGCCTTTCTTGGGTCATCCATGTCCTGACGCATGTAAAGTAGTAACATTATCAAGGTCAGTTATATGTGAACTCTTGAATATATGGCTCAATACTTCAAAGTGTTTCCACACATCCGTTCTTAAGtaatgcattgtgggggatattatTATAGCACCAGTTATTAGTAGTAAATCTGTAGACATCAACAGCCTCTTCATTTGCTTGACTGTATTAAGTATTTGCCACAAGCTTTAACCTTGCGCTTCTGTGTCCCTTTACACCCATTTGAAATGTTACATTAATCCGGTGTTCTTTTGTGCCgttttgttttttcctccctCTGTTGAATttgttttatgtgtttatgtaaaaattatttgtatttaataaCATAAACATTTACCCTTTATGTTCCTATTGATGTAGTCTTTTTGTTATACTCTACAGCTATGTCATGGACAAAATATTAATCCTCTAGTTTAAGAAATGGTAACAACCCACCCTATAACTGATGTTTTGGACCcatatttaaaatgcaacaaCACTCATTACAGAGAGGAATACAACTGCAAGGTAATTATTTGTAATATCAGGGACCTGTGTACAGTGTGACACAACAGTATTGGATTTAATAAGGATGTTCGTTCGTTCACTTCTGTCTCTGATGGTTGTGAGTGGAACTATGTCCTCAAGGTCATGATTGGAAAACCATACACTAAAACGTTACCCAAAGAAACAATTACATACCTTACAAGATGTATATTGTAGATATACTGTACTTTTCTCAATGGGAAAATACAAAAAAGGCCCACTGAAGATACTTTTATATTTAtctaatttatgtatttatttatttatttatttttttgggcctTATGTAATCAATTATAGATTCTATATTTTAACCTGAAGTGTTTTATATATTAAGTtggtatatgaaaaaaaaaaactgaagatttatatatttttttgtttgtttactttgtGTTTTGATGACCCTTGAAGCCCTTTCTAAGAAtgaggtcttttttttttgtcactgtccACATTTTTACTTCTGTTGGTGAACATAATAAAAGCATATGAAAATACACGAGATacaagatttattattattttttttctattctttttttattttttattttttattttttttaagtatttgGGATTACCTACTCAATGATTTGATTGTATGACTGCGAAAAATAATGTGAATCATAGGAAGTTCTTTGCATGTCTGTGGGTTTCAACTTCAAAATCAGATATAAATTTTTATAATATATTCCTTTTGTTTCTACAGTTGCGGAGGCATACCCCATGATGTATTACTTTAAACCCACGATGTGTCCATTAATGTAAATACACCATGAAAACATTTACCATGTTCAATCAGAATAGAAATACTAAACACAGTGTCTAGTGATAATCAGTTCTCATTTACTCCATAACCTTTGTCTCTTTCTCCCTTCAATACTGTCATACATGGCACTGACGCAattacattgttttttttgtttttattttgatatttagATGCAGTTGTCCTGTACCTCTTGCCACTGAAGTGTAATTATGCATTCTAATTGGGTACTTTGGTTTGGCAACATTGCTAATATTATATTACGTCATTAACAACCCAGCAAATATAACAGCCTACAGGGAAAAGCAGAAATGAAAGGTGTTATTGCGACCAATACATGCATGACCGTGCTGCAccaaatgcatgcatgcattgCGCAAAGGGGAAAATGTGCATGATTTGAGATGGCAAAATGATGCACAATGATGACTAATGGCTACAATTGTACAAACAGGGCTTTTGGAACTACtttttattttccccatttcatttttaaaagtgTGCTAATTCCAGCTTCTGTTGTGTGGAATGTACTGTACTGCATAGTGTTCTTAGGACATCGTCACATCTAATTCTCAAGGGCCTGTGTGAAATCTGTGAAATATCAACAACCATATTGCCTGACTGGCAGTCCACCGTGCATAAAATGGCACCTTTCACTATTCAATTAAAAGAAACTAAAACCTCC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02158	Neuregulin	Neuregulin intracellular region	Disordered	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002154	Domain	Neuregulin, C-terminal	Interproscan
IPR018250	Family	Neuregulin-1	Interproscan
IPR040180	Family	Neuregulin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11100	HEREGULIN-NEUREGULIN FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005102	Molecular Function	signaling receptor binding	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0007171	Biological Process	activation of transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0007399	Biological Process	nervous system development	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0030296	Molecular Function	protein tyrosine kinase activator activity	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0045499	Molecular Function	chemorepellent activity	Interproscan
GO:0048513	Biological Process	animal organ development	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-