Gene detail

Detailed information of SKAU_T00362770 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00362770	G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE	CM056392.1	30401657	30448864	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00362770

GCAGCAGTCTCGCAGTGTCCGTGTTTTGCGCTTCAGGTAAACGTTGTAGAAAATGTGACTGCAGCGGGCTGTCCACTACAAGCGGCACATGCAGAGTCTAATCCTGAACCTGACCCGAGCCACGGGGGAAGACACAACAACCTCACCAAATAACTCAACCGGAAGGGGGGAAACAACCTGCTTTAAATTTGCGCACCGGGAGGCAGAGCACATTGCTAAACTGTGACAGCTCGGAGTGTAGGCTACTTACTAACTGTGCACAAGTTTCAAGTCCATGCATCTCTGGAAACACATGTTTAACTGAAATATGTAGCCGTTCGCCCCAATGTTGACAATCAACATTGTAAGCTGCGTTGAAACATGCTTGCATTACAAGGAACTCTTTTAACCTGTGCACGGAGCTGTTCTACGCGTTCAGAATGGCAACACctttattagatttttaaagCAAGAGATAAAGACCGACAAAATCACATTCCACAGCCGCGGACTGCGAAAAATCGGACGATACGACTTGATTACACTCTACAGACCTATCAATACTTTTGTGGTAACTGGGCAAAGAATCGATATTGATGGAGCTGGAAAACATTCTGGCAAATACCGTACTACTGAAGGCAAGAGAAGGAGGAGGTGGGAAGCATAAAGGGAGGAGCAAGAAATGGAAGGAGATCCTGCGCTTCCCTCACATCTCACAGTGCACAGAGCTGAAGAACAGCATCGAGCGGGATTACTTCAAGCTTTGTGAGAAGCAGCCAATTGGGAGAGAGCTTTTCTATCTCTTCTGTGAGACCAGACCAGAGCTTTCGTGCTGCATTCATCTACTGGATGCCATGGAAAACTACGAGGTGATGCCGGACGAGAAAAAGAAGACCTGCGGCGAGAAAATCATCAAGCAGTTTCTCACCAAGCAGtccTCAGAGTGTGTTCCGGAGGTGGCTGATAGCTACGGTCAGAAGTGCGGACAGAACTTGGCGATCAGCCCGTGCAAGGACCTCTTCAGTGACTGCCGAAAGGCCCTTCATGAGCACTTAAGTGGGGAGCCCTTCTCAGCCTATCAGAAGAGCATGTACTTTGATCGCTTTGTACAGTGGAAAATGCTGGAGAGACAGCCGGTCACAAGAGAGACTTTTCGCCAATACCCGCATACTGGGAAAGGGCGGGTTTGGGGAGGTGTGCGCGTGTCAGGCGAGGGCCACAGGGAAGATGTATGCCTGTAAGAAGATGGAGAAGAAGAGGATTAAAAAGAGGAGGGGAGAGGCCATGGCCCTCAATGAGAAGCAGATCCTGGAGAGGGTCAACAGCAGGTTTGTGGTGAGCTTGGCCTACGCCTACGAAACCAAAGACGTGCTGTGTCTGGTGCTGACCATCATGAATGGAGGGGACCTCAAGTTTCACATCTACAACATGGGCACGCCCGGGTTTGAGATGGAGAGGGTGCAGTTCTACGCTGCAGAGATCTGCTGCGGCCTGGAGCACCTCCACAGGGCGTCCATTATCTACAGGGATTTAAAACCAGAAAACATTCTTTTAGATGACTACGGACACATCCGGATATCTGACCTTGGTCTGGCCATTAAAGTGCGGAAGGGGGAGACCGTTCGAGGCAGAGTGGGGACAGTAGGATACATGGCCCCGGAGGTGATCAATAGCGAGAGGTACAGCGTGAGTGCCGACTGGTGGGGGCTGGGCTGCCTGATCTACGAGATGACAGCCGGACGAACGCCCTTTCGGATGTACCGGGAGCGCGTGAagagggaggaggtggagaagAGGGTGCAGGAGGACAGGGAGGAGTACAGCGATAAGTTCAGTGAAGACACCAAATCCATCTGCAGGATGCTGTTAACCAAAGATCCAAAGCAGAGGTTGGGGTGCAGGTCAGATGGGGCAGTAGGGGTGAAGGCTCAACCTTTCTTCAGAACCCTCAACTTCAAAAGGCTGGAGGCAGGGATCCTGGAGCCGATCTTTGTGCCAGATccgAGAGCGGTCTACTGCAACGACGTGCTGGACATTGATCAGTTCTCCACCGTCAAGGGCGTCGACCTGGACCAAATGGACAGCGATTTCTATGCCAAATTCTCCACCGGCTGCATCTCCATTCCCTGGCAGAATGAGATGATTGAGACGGAGTGCTTTGACGAGCTGAACGTGTTTGGGCCCGACGGCTCCCGGCCCCCGGACTTGGACTGGAACAATTTCCCCGAGGCCCCACGCCGCAGCCTGCTGGACCGGATCTTCAGGAGACAGCAACCAGAGGTGACCAGCTCTTACACCCGGATGTTTTCCAGCACAAATTCTGTGAACTCCGTAAGCTCCACCCCTTAGTGGTGGTATGGTATGGGAGGACTGCGCCTTTCAAGGGGCCCACACAGCACGGAATCTCTACATGAACACTGACCAGAGCACTGACCGAGTCTGTGGATTTACAAGAATGTGTACATAGGACTGTCGATGAAACAAAGGACGTAGTCTCCAAATCCACCCTCAGGACTACTAGAACAAAAAGACACTTGTGGCAAGGGGCcagtcaaatataaaaaatacaatttcAGGGGAATTACTTTCAATGAAGGACCACTGCAAGGAAACTAAtcatggctgaatcccattctctggtctcgcagactcgtggactcaaaggtgCGTTCTCATTAAGTCCGTGAGTGCTCAGGGCCATCCCATTGTGAAACCAGCGTtgttggcaagtgctcttatgtggACTTTTCACACCCTCTATCCGCGCTTtttgcaagtctgcatcaatgcacttacctgccctcggaaatacgccattaaagtccacGAGTCCATGAGGgttcagtttgggattcagcccatGTCTTTGCTGTTGTTGCagttgtaaatgtaaatgtacatatacactcacatacatgtgcgcacactcaaaagcttgcTTTGCCTTGTGTAAACTCACTCCAAATATCAACTCAACTTTTTTTTGGGTATAATTTTAGTTATAattgtgtgtggagtgtgtgattaagttttaattgtgttttaaacaattttagttttaaaagtggaTGAAGTGACATTGGGGCAGTGTTACCTATAGAAAATGTATCTAGCTActgctaaaaaaataataaatactagACACAATTAAGCTGTAGGTTGTAAGCCTGAAGCGATGAAGCTGGACAACCACAGAACGGGGACAACCCGTTAAATTaagatagcgagctaaattaagtttcaaccctgggttttctgtttcacgaagccgactcacttttaatctgggtatattgccacggcaactcacggctaacctgctccagggCAGGTGATGTTCAGGGTAACAGATTGAAAcacataaaagcaccgccctttcaccaatcaactccttggctatgaaaaaaggcgtctccattccaaaggatcccgtagagatacagtatgtgcggatactgagggaatctcatcgcagggcgagattagtgagttccgcagttttcccccacaggagagaaatacgttgctctagtacagcccatgctgcaccgctataggcttgttgttgcagaaactgccccttttatgggaacacgcacgcaccttgattaataaagctagttaataaccacgttcgtagtaccggttaagacagattgcggtggttaggctttctgaagccagataACACAGAAAAAACCccggctatgttaagcttccttcgtagtatacccccctgaacAGCACGGGTACAAACAGATGCCACGTGAGGTTTGGAAGCTGCTGAAGCTCCCATCTCCATTGCTGCCATTCATAGATTTCCTGTCAGGAGGTCCTGTTCAGAGACACTCAACAGTTCTGCCAGCCAGAACACACACACTGtcggaaactggactggactccactGGACTTTACGGCTTCTTCTACAGTCAACTTCATAAAATTGTgccatttcttcttttttctggCCAGATACATATGTAAGGAAGAGAAAAAATACTTATTTGTATAATACTTCAGAAATCCATGGTTGGGTGTGGATTGGTCAAGACTCTCTACTTAAATGTCCTAGTGGCTGTTGGCTGAGAAATGGCAGTTATCTCAAGAATAGCCGGTAGTATAGTACCATAGTATAGTATGCATAGCCCCACATTACTAGGCAATAGTACTGGTCTAGACTGTACTGTAGCTATTAAGACTGCATCTTCAATCAAAAGTAAAAGATAAAAAGCATACACATGCATCTTAAAACATGTTGGGCAAACACTGTCTGGCCCGCGACTGCAGCGCACAGCCTGAAAGGAAGTAATCAATCCACACTCTCGTTTCACTGTCCTCCAGAAACCCCTTAGCACAAGCAGTTAGCTATAGTGCATTTCAGCTGCAGCTGTTTTTGTCCAGTATGAGGCTGCGCTTTTAAAAATACCATATGTCtgatataaatatttataaaacTCCAGATAAATGCCTCCTTTTTCACAGATTAGACTGGATTTCCATTTGGAAAAAAAAGGGACTTCTGAGTTCATTACTTTTTCTGTGTGTCGTTTCATTGTTATGCGTCTGAAATATGCGAAAGTGAAATATGAGACCGAAGGCCCTCATTCAATCTTAACCGCAATGCGCTTTGTATCGAAGTGGAACTGGGAAATTAATTTCGCCAAGTGCTCCGCACCCCCCCAGGTTTTTGATTTACACACAAGAGGAACTCTTGTAATttctgaaatgaatgaaaaatgttCAGGTGAAAATGTAATGTTCTCTGGAATTCTGGACAAGGTGCAGAGTGGTGAGATTATATCAAGGCCTTCCAAAGCGCAGAGAAagaacattacagtacattacaataTCACCTGACTGTACAGAGCCAAGCACAACCAAACAGCATCGGATTGTACAGAGCCCAGCACAAGAAACAACCAACAGAGCCCAGCATAAGAAACAACCAACAGATTGTACAGAGCCCAGCACAAGAAACAACCAACAGATTGTACAGAGCCCAGCACAACCACCATCTGACTGTACAGAGCAAACTGAAAGGAGTGGGACCAACATCATGTGGCAGGCTGCAGACCCCATTTCCTGTTGGCTTGAGACCTTTCCGCCTCCTTATTTCCACGCAAGAGGCTGAAATACATGGGGTTCGCACTCTCCCTGCAACACTTGGGAAAAccatgttatttaaaaaaataaatgttctgtATAGAAatgaaagtaataaaaaaaaattaaaaaaagtatagtataatggttaaggaactggccttgtaacccaaaaggttgccggttcgattcccaggtaggacactgccg

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000239	Family	GPCR kinase	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR000961	Domain	AGC-kinase, C-terminal	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24355	G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004703	Molecular Function	G protein-coupled receptor kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0009966	Biological Process	regulation of signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-