Gene detail

Detailed information of SKAU_T00354210 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00354210	TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 11	CM056392.1	678790	687261	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00354210

GCGCATGTTCAACAGAAGGCGTTCTCGCCCGTCGCATGTTTGGTGACGTTTTAACCTCGACGCCAGTCTCCAGGGCCGAGGCCTAAGAAATTTTAATtcctataatttttttttttgaacaaatgTACACATTCCTGTACCCGTTTTGAGCGGGGTCACGACCTTATGAGGCCTTGTTTCTGGGTAGATGGTGGGAGAGCAGCGTAGCtggtagctggctagctaactctATCTAATAACAAGGAACTTGAGTCGAGGAAACTAGGCTTGAAGAATAAAAATTGAAAAATGACATCTCGGAGGTGGTTCCACCCAAACATCACGGGCGTGGAGGCGGAGAACCTGCTCCTTACCCGGGGTGTGGACGGCAGCTTCCTGGCCCGGCCCAGCAAGAGCAACCCAGGAGACTTCACTCTGTCCGTCAGGCGGAATGGAGCGGTCACCCACATTAAGATCCAGAACACGGGAGACTACTACGATCTGTACGGGGGGGAGAAGTTCGCCACACTGGCCGAGCTGGTTCAGTACTACATGGAGCACCACGGTCAGCTGAAGGAGAAGAATGGGGACGTCATCGAGCTCAAGTACCCGCTCAACTGCGCCGACCCCACGTCCGAGAGGTGGTTCCACGGTCACCTGTCGGGCCGCGAGGCGGAGAAGCTCCTCACAGAGAAAGGGAAGAACGGCAGCTTTCTGGTGCGGGAGAGCCAGAGCCACCCGGGTGACTTTGTACTGTCCGTGCGCACCGGCGACGACAAGACCGACACCAGCGACGGCAAGCCCAAGGTCACCCACGTCATGATACGCTGCCAGcatGACCTAAAGTATGATGTGGGTGGGGGGGAGAAGTTTGACTCCCTCACTGACCTGGTGGAGCATTACAAGAAGAACCCCATGGTGGAAACGCTGGGGACGGTCCTGCAACTCAAACAGCCACTGAACACCACGCGCATCAACGCGGCGGAGATCGAGAGCCGTGTGCGTGAGCTCAGCAAACACGCTCCAGCAGCAGGAGTGCAAGCTGCTGTACAGCCGAAAGGAGGGCCAGCGCGCCGGAGAACAAGAACAAGAACCGCTACAAAAACATCCTGCCCTTCGACCACACCCCGCGTAGTGCTAAACGACGGGGACGCTACCGAGCCTGGCTCCGACTACATCAACGCTAATATCATCATGGTCGGAGCTGACTCTACGCCGGAGCAGGAGTCCCAAGTGTAACAGCGCCAAGTTGAAGAAGAGCTACATCGCTACTCAAGGCTGCTTGCAGAACACCATCAGCGACTTCTGGAGGATGGTGTTCCAGGAGAACTCCCGCGTCATCGTCATGACGACGAAGGAGGTGGAACGGGGAAAGGTACCCGGCCGCTGTACCATCCAGTGCTTCCTCTGGGAATCTCTTAAATGATGTCCATTGCATTAAATAACATCGCATCATGTTGTTACAGTATGTTATGCTACAGTGTACATTGCATCACATTACACTATGTTGTGTTACATTTACGTTGTTCCATTGCATTACATCACATTGTTCCATTACATTATGTTGTGTTAAGGCCGTAATATACTTCACGCTAAGTACGTGTACGCATACGCCGGACGGCTGCCGCACGTGTCCTGCGTTCGTTTGGTGCGTCCTTTGTGCACGTCTCCCTAGGCCTTGAGTGTACGCATACGCAAGGTGCAATACCAACAGAAATCGTGGGGCAGTATACCAAAGATCCTCTGACGTTCTGCGAGATGGAAACGGGAAACAGCGAAGAAGTAGTATTACACAATGGCGGTGAATTTTGAAGAACCTGCCTCCTAGTGGACATAACTTTTAAACATCCATTTATGCATAAAGTACGCAGTGGAGTACGTGAACAATGCCGCTTGCGTACGTACATGTATCAAGGCCTTTacgttacgttacattacatcacattacgtTGTTACATTACGTTATGTAACTGAAGATGAAGTGGATAAGAGTTTGGCAGACCTAAGCGCATGATGTTGGGTCCCACACACTTATCCCTTAACCCTTATGTTGGTTCCCACACACTTATCCCTTAACCCTTATGTTGGGTCCCACACACTTATCCCTTAACCCTTATGTTGGGTCCCACACACTTATCCCTTAACCCTTATGTTGGTTCCCACACACTTATCCCTTAACCCTTATGTTGGTTCCCACACACTTATCCCTTAACCCTTATGTTGGTTCCCAACACACTTATCCCTTAACCCTTATGTTGGTTC

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000980	Domain	SH2 domain	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46559	TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 11	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004726	Molecular Function	non-membrane spanning protein tyrosine phosphatase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0030971	Molecular Function	receptor tyrosine kinase binding	Interproscan
GO:0050839	Molecular Function	cell adhesion molecule binding	Interproscan
GO:0070374	Biological Process	positive regulation of ERK1 and ERK2 cascade	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-