Detailed information of SKAU_T00344730 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00344730TROPOMODULINCM056391.157539815801831+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00567TUDORTudor domainDomainInterproscan
PF03250TropomodulinTropomodulinFamilyInterproscan
PF12872OST-HTHOST-HTH/LOTUS domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002999DomainTudor domainInterproscan
IPR004934FamilyTropomodulinInterproscan
IPR025605DomainOST-HTH/LOTUS domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR041966Homologous_superfamilyLOTUS-like domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10901TROPOMODULINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005523Molecular Functiontropomyosin bindingInterproscan
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0005865Cellular Componentstriated muscle thin filamentInterproscan
GO:0006936Biological Processmuscle contractionInterproscan
GO:0007015Biological Processactin filament organizationInterproscan
GO:0030016Cellular ComponentmyofibrilInterproscan
GO:0030239Biological Processmyofibril assemblyInterproscan
GO:0051694Biological Processpointed-end actin filament cappingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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