Detailed information of SKAU_T00338800 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00338800AUTOPHAGY-RELATED 2, ISOFORM ACM056390.12281681922855843+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09333ATG2-VPS13_CATG2/VPS13, C terminal domainDomainInterproscan
PF12624Chorein_NVPS13-like, N-terminalDomainInterproscan
PF13329ATG2_CADAutophagy-related protein 2, middle RBG modulesRepeatInterproscan
PF13897GOLD_2Golgi-dynamics membrane-traffickingDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR009038DomainGOLD domainInterproscan
IPR015412DomainAtg2/VPS13, C-terminalInterproscan
IPR026849FamilyAutophagy-related protein 2Interproscan
IPR026854DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan
IPR026885DomainAutophagy-related protein 2, middle RBG moduleInterproscan
IPR036598Homologous_superfamilyGOLD domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13190AUTOPHAGY-RELATED 2, ISOFORM AInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000045Biological Processautophagosome assemblyInterproscan
GO:0000407Cellular Componentphagophore assembly siteInterproscan
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0006914Biological ProcessautophagyInterproscan
GO:0032266Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0034727Biological Processpiecemeal microautophagy of the nucleusInterproscan
GO:0044805Biological Processobsolete late nucleophagyInterproscan
GO:0061709Biological ProcessreticulophagyInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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