Gene detail

Detailed information of SKAU_T00336590 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00336590	HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1	CM056390.1	17808669	17823924	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00336590

TTTCAGTGTGACACTTGGTTTTAGACACAATTCCGTTTCCATCTTAGAGTACAATGGTTTCCAGTAATTTCTACGGTCGGAGTTAAAAAGCGACCGAGACTATCTATTCTAGTAGTAGTAGAACTGTGACCGACAGAATAGAGATCTACGGTCTATGATAGAGATACTGCAGTGGTCGACAGTTTAACATTTGCCACTCACTTAATTGGTATcgtttttggtagctagctaTAATAACTGTTTTCCCGGTTTGAACAACCATGGCGAAGTGGGGAGAAGGGGACCCTCGCTGGATTGTGGAGGAGAGAGCCGATGCGACCAACGTCAATAACTGGCATTGGACGGAGAGGGATGTGACAAACTGGTCTTCAGACAAGCTGAAGGAGCTGCTGATGGGGGTGCATGTGGAAAATGATGAGGGAAGCTGTGAGGTCACGGAGGTCAGTAAGCTGGAGGGAGAGGCCTCTATCAACAACCGCAAAGGGAAGCTCATATTCTTCTATGAGTGGAGCATCAAAGCCACATGGACTGGAATATCCAAAACCGGAATCAAATATAAAGGCAGCATAGAAGTTCCAAACCTCTCCGATGAAAATGACATGGAGGATTTGGATATAAGTGTGACGCTTTGCAAAGAAGAACCAGAAACGGCTCTAATAGGTCTCATGAAAAAGGAAGGGGCCAATAAAATCCGAGCTGCGCTGGGGAGCTACGTGGGTTACCTTAAAACAGTGTTTACTCAAGGCATGATCCTTCCCACAGCCAATGGGCTGAGCAAGCAGCAGCCATCACAGTCCAAAGCGGACAAAACCCAGATTGGCTCAAGTACCTCAGCCCCCCCACCCAGCACTGGGGTGAAAATTCCCACCTGCAAGTTCAGTCTGAAGGAGAACTTTCTCACCTCCCCTGAAGAGCTTTACAGAGTCTTTGTCAACCAGGAGATGGTGCAAGAATTCACACATGCAACAGCCATGGTGGACCCACAGAAAGGAGGAAGGTTTCGCTTATTAGACGGGAACATCTTTGGAGAGTTCCAGGAGCTGGTTCCTGACCAAAAGATTGTCATGAAGTGGAGGTACAACACATGGCCCTGTGAACATTATTCCACGATCACCCTGCACTTCTTGGACCATGGAAGTGAGACCGAACTGAAGGGGGAGTATAAAGGAGTACCGGTGAGCGAGGAGGGCAGGACTAAACAGGGCTGGCGGCAGTATTACTTTCAGGCCATCAAACAGACTTTTGGTTTTGGAGCACGGCTGTACTGAAAATGCACTGTAACGATGCACTGTAATGTACTATTCCTCTTATATGAATTTGAAACCATACAAAATGTGAAGAGAAAGGAAAACTGTCTGTCATCAGTTGATATGTGTTGAAATGCTTTCATTTGTAAAAGTTAGCACCTACTGTACAGCGAGTATTAATGAATGGTGCTTTTCAGGGTGGAAGACTTCGATGGGTTGTTTGAGTTCGTAACAAGGTTAAGAgagtgaaaatgaaatgaaactcTGAACCACTAAATCATTGTTTATTTCTGATGTATGCATTCAAAACTAAGAAAGTGTATGCTTGCTTTGTCAGTTTTTACTTGTACACATTCACTTTTATACAGTATGTTGATATGAGTAAATGTTCTTTAAAGATCACATCACTGGCTCTAAGTAAATGTCTGTCTTCTTAAATACTGTTCATATCTGATGGTGACCTCAACCTTTGAAGCCAGAACTCAAACCCAGGTATTACGTCAAACTTCAGACAAGTGCAAAACACTGTGCTGTTCCCTTCTCAATTAAAATCATGTTAATTTTATTTGGTTCTTTGCATTTGGATAAGAAGCATTTGCTTTGCTTCTAGGAAATTAAGTATAAATCATGCTACAACGTAACGTGAAAATcgtaattaaataaaattacttCTATAAGAAGCCAATTTGTTGCTGTGAACATATTTCCTATGCAGACTCCTCATTATAATGTAATGCAGAGGACTCTCCTTTTGATTTGTTACAAAATGTGTACATTTGAAGAAATAATATATGGTCTTTGAGAGAATAGTTCACcgtgttttaatttattttaacattTCAACCTCTGCAGTATTCTTTGACATGAGCCCTCAT

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08327	AHSA1	Activator of Hsp90 ATPase homolog 1-like protein	Family	Interproscan
PF09229	Aha1_N	Activator of Hsp90 ATPase, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013538	Domain	Activator of Hsp90 ATPase homologue 1-like, C-terminal	Interproscan
IPR015310	Domain	Activator of Hsp90 ATPase AHSA1-like, N-terminal	Interproscan
IPR023393	Homologous_superfamily	START-like domain superfamily	Interproscan
IPR036338	Homologous_superfamily	Activator of Hsp90 ATPase, Aha1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13009	HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001671	Molecular Function	ATPase activator activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006457	Biological Process	protein folding	Interproscan
GO:0032781	Biological Process	positive regulation of ATP-dependent activity	Interproscan
GO:0051087	Molecular Function	protein-folding chaperone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-