Detailed information of SKAU_T00335770 in Synaphobranchus kaupii Gene info
Gene IDAnnotationChromosomeStartEndStrand
SKAU_T00335770ATP-DEPENDENT RNA HELICASECM056390.11590193415937003+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00567TUDORTudor domainDomainInterproscan
PF21010HA2_CHelicase associated domain (HA2), ratchet-likeDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR002999DomainTudor domainInterproscan
IPR007502DomainHelicase-associated domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR047384DomainTudor domain-containing protein 9, Tudor domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0010529Biological Processobsolete negative regulation of transpositionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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