Gene detail

Detailed information of SKAU_T00327640 in Synaphobranchus kaupii Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
SKAU_T00327640	TYROSINE-PROTEIN KINASE BAZ1B	CM056389.1	29088753	29094054	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

SKAU_T00327640

ATGGTCAAGTTCCGCTACAGTTGGCCCTTCAGGGAGCCGGTGTCTGTGGACGAGGCGGAGGATTACCTGGACATCATCTCAAACCCCATGGATTTCCAAACCATGCAGCGCAAGTTCACCGAGGGTCAATACCGCCACAGCAGTGACTTCCTGGAGGACATGAAGCTGGTCTTCTCCAACGCCGAGGAGTACAACCAGCCCGGCAGCGCCGTGCTGGGCTACATGACCAAGACCGAGCAGAACTTCCAGGAGCTGTTGCAGAGGCTGGCCCCGGGCCTCAGCTACCTCCGCCGCCGCGCCCGCAAGTGGGCGGAGCCAGAGCACCGGCCACAGAACGGCAAGCAGAAAAGGACCGCCaagcaggaagaggaggaggatgatgatgatgatgaagaggaggaggaggaggaggggggcaggCGCCAGAGCGCGCGGGGCAGGAGGCAGAAGTATGAGGAGAgcgaggaggagcaggaggaagaggaggagagccGCACGCGGAGGACAAGCAGGCGCGCGGCCGCCAGCTCCGCCCACAGGGGTTACCGCGAGCAGGAGAGCGACAGCGAGCGCGAGGAGGCGGACAGCAGGAGGGCCAGGCGGAGGGGGGGGCGGAGGGGAGCGGGCGATGGGGAGAACAGCGACGACGACGACAGGGCGGGCCAGCGACATTCCAAACGGCAAAAACACTCCCTCTGAAGAGCGTCCGGAAGAGAGGGGGGGCGCGGGCGGCGTCTGtttcctttctttcactcgtttAGGAATTCTACCTGCTTTTTCTCTAAACGGGCCCATGCCCCCCCCGATTATCAGACTTCATTTTATGTTCATATTTTGAGAAACAAATTTGGTATTTGTAAGGTGTTTATTACTGGTGAAATTTTTTGAACTAAGAGgataaaaaaaagtatgttttagTATTGAAGATTTTGAGCTCTTATAGGATTTTATTTGAGATTTGTTATGAGTATGATTAAAACGGAACACTTTGCAATTTTAGTCTGTCACCCTGGCCAGTGTTTGACGTGGATGTCTTTGTTAGGAAAGCTGTAAGAACAAGGAGGGTTctgggaggtggggtggggggtgtcaggggggggggcattgacAGCTGTGTGGAGAGAGATTTGGCAGCTGCGAGGTGAACTGtggtacttttttatttttactctttTTATGGGACACGTCCCTTGTCCGTCTCCCAGGCTCCTGCTCGGACGGGGGTCTCTTAGGGGGAGCGACACGCAAAGGATTcgtctttttaaaaaacaaaaaaaattctaaCAAATTCAGGTTCTTCATTCTATATGCAACACAAGGTGTGTTCAGCAGCAACACTACAGATATGCAAGGGTTTCATAAGGCTGAGTAAGGGAACAATGAGCCAAGCCTGAGCTACGGCAGCCTGTCGCGCTCAGGCCAACACAACTCTACAGCATTCGGGGTCCAGGTCCCTCAGGCGGCGCGGGGGCAGTCCAccctccccccccgcccctaTTGTCTCGGAAGCAACAAGTGGCACCACACTTTATGTGGCACCCCTTTTTTTTGTACTTTCCTAACTAGCAAAGGGGGGCCGAGTGTCCCCTTCAGCTGCACTACCTCTTGTGTACAGTGATCAGAAGCAGTGCTGCTCAGTGAATGCACTGTACAGGTTTTTCCTCATGCTACATTTCTATTAAACAGTTGCATCTGGTTGCATTTTTTCTTTGCCTAAAATGCATGAAAAAGTGTCGACTGGGATGAATGTGTAAAAGgaaaatgtatgtatatatgaatTGACTTTTTTTTGGCACAATTCAGATGCTTCTCAGCAGGGTGTAagccttgttttaaaaaaattgagaacTGAGGGCAAGTGGAAACGCACACGTGTGCAGCTACAAGAAATTCTGTGCACTGACACGACAGACCAGGTTAAATTCTGTACTGATGCAGTATATACCAGCTCTGCACTGGTGCAGTATATACCAGCTCTGTACTGGTGCAGTATATACCAGCTCTGTACTGGTGCAGTATATACCAGCTCTGTATTCGTGCAGTATATACCAGCCCTGTTTATGGATGCAGTGTATATACCAGCAGTATGGATGCAGTACAGACTAGGCTCAGGTCAGGTAGAATAGCTGTAGCTATATGCTATGTACAGATTTTCCCAGTTCAGTTACTAAAGAACACAAATTCCCTTCTGTCACCTGTGGACTGTTTGCGTGGACTGTTTGCGTGAACAGCTTCAAGGCTAGTTTGTTTGGTCCGATTTCATAACACAAAGTGACAGTTTCCAAAAGCTCCCTAAAATCCAGTTGAATATCCAGTCATCCGTGaaataaatatttgtaaatgGTGAGTCTGGCACCTTTCTATAATTAATATTCCAAAGTGGAGTACACTTGCTCGTTATTTGCTGAGATTAAAGTAGAATGTTTTGATCAGTATGTTACAGGTAATGCTATTTAACCCTTCATTCTTTTGGTTTTGCTTTGCATTCAAATTTAGGCAGAATCTGTCAACGCTTTCCATTTCATAGCTGTGCGCAAAAATGCCATTCTGTCTGTCACCAGCAGATGTCGCTCTTGTTTTGTGTCTTCGACAAAGAGCTGACTCTTAAGAGCAGAGGTCCATACCTGCTTCAGCATCTCCGATCTGTTCAATTTGCTGTCTTGGCTCTCTATGTGTCCCCTACGGGCGGAAGAGGTAGAGCAGGCTAGTTTCACAAAGTCCACTCCCCATCATATCTGAGACTTGCTATTTAGCATCTTCATGGCAGAGGGGTTGGACTGGTGTTGCAGAAGGATGTGCACAGCACATAATGTTCATTTGGAGAGGTTAATGTGATGGTTCTGTTCAAAGTGTTTGTGGTTTGTATTGGTCCTGTGCTGTATCGTACAGTGTAGTAGAACACCTTGGGGAGCCGTGCGTATTTTCCCTTTGATCCTGCGGTGGCCAGTCTCCCTCACTCTTCGCTATGGCGACTATGCAGATCGCCGTAGCAACCTAACGGTTATTTCTGACAGGATCCAGAATCTTACCTTTTTTTAATAGCAAAAAGCTCTTGACTATCAGAGCCACCTGGTCACAGGGTGGCTGTCTCCATTGTAAATCTGCCTCTCTGTTTGCTAGGTCTCAAGGTCTGTGACAGTtctgagtttttaaaaaaataagctcAGAATGGAGTACAGATGGAAACCGTGGAGGCTCCTTTGTAATTCCAAAATAAGAACTCATTTGCATCTCGGATTCCTTTGTGAAAATTAGCATCCCAACCATCACTGCCAGCTTTTATGTATTGGGACG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00439	Bromodomain	Bromodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001487	Domain	Bromodomain	Interproscan
IPR018359	Conserved_site	Bromodomain, conserved site	Interproscan
IPR036427	Homologous_superfamily	Bromodomain-like superfamily	Interproscan
IPR047174	Family	Tyrosine-protein kinase BAZ1B	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46802	TYROSINE-PROTEIN KINASE BAZ1B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0006974	Biological Process	DNA damage response	Interproscan
GO:0035173	Molecular Function	histone kinase activity	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan
GO:0090535	Cellular Component	WICH complex	Interproscan
GO:0140801	Molecular Function	histone H2AXY142 kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-